Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02472 and BL02979

See DNA alignment / Visit BSNT_02472 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:03
# Commandline: needle
#    -asequence pep-align/BSNT_02472___ctaB.1.5803.seq
#    -bsequence pep-align/BL02979___ctaB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02472___ctaB-BL02979___ctaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02472___ctaB-BL02979___ctaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02472___ctaB
# 2: BL02979___ctaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 308
# Identity:     247/308 (80.2%)
# Similarity:   279/308 (90.6%)
# Gaps:           3/308 ( 1.0%)
# Score: 1328.0
# 
#
#=======================================

BSNT_02472___      1 MANSRILNDTAIDGQIEETTAWKDFLSLIKIGIVNSNLITTFTGMWLALH     50
                     ||.:||..|||::|||||||||||||:|||:|||.|||||||||||||.:
BL02979___cta      1 MAETRITADTAMNGQIEETTAWKDFLALIKVGIVYSNLITTFTGMWLAFY     50

BSNT_02472___     51 ISGLSFLGNINTVLLTLIGSSLIIAGSCAINNWYDRDIDHLMERTKVRPT    100
                     .|.||||||::.||.||.||||||||||.|||:||||||.||:||:.|||
BL02979___cta     51 FSNLSFLGNLDIVLFTLAGSSLIIAGSCVINNFYDRDIDQLMQRTRTRPT    100

BSNT_02472___    101 VTGKIQPSQALWSGILLVALGLIMLLMTTVMAAVIGFIGVFTYVVLYTMW    150
                     ||||||||||||.||||.|||.||||||.:.||.:||:||||||.|||||
BL02979___cta    101 VTGKIQPSQALWFGILLTALGFIMLLMTNLTAAGVGFVGVFTYVFLYTMW    150

BSNT_02472___    151 TKRRYTINTVVGSVSGAVPPLIGWTAVEGNIGVVAWVLFMILFIWQIPHF    200
                     :|||||:||::||||||||||||||||:|:|||.|||||:|:||||||||
BL02979___cta    151 SKRRYTVNTIIGSVSGAVPPLIGWTAVQGSIGVEAWVLFLIMFIWQIPHF    200

BSNT_02472___    201 LALAIKKTEDYRAANIPMLPVVYGFEVTKRQIIVWVACLMPLPFFLGSLG    250
                     |||||||||:||||||||||||:||||||||||:|:|||||||||||.||
BL02979___cta    201 LALAIKKTEEYRAANIPMLPVVHGFEVTKRQIIIWIACLMPLPFFLGGLG    250

BSNT_02472___    251 LPIVILGLLLNIGWLILGLMGFRSKNIMKWATQMFVYSLNYMTIYFVAMV    300
                     |||||||.:||||||:.||:|:||||||||||.||||||||:||:|||||
BL02979___cta    251 LPIVILGTVLNIGWLVCGLVGYRSKNIMKWATLMFVYSLNYLTIFFVAMV    300

BSNT_02472___    301 VLTLF---    305
                     |.|||   
BL02979___cta    301 VFTLFKIG    308


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