Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02472 and BL02979
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:03
# Commandline: needle
# -asequence dna-align/BSNT_02472___ctaB.1.5803.seq
# -bsequence dna-align/BL02979___ctaB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02472___ctaB-BL02979___ctaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02472___ctaB-BL02979___ctaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02472___ctaB
# 2: BL02979___ctaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 938
# Identity: 676/938 (72.1%)
# Similarity: 676/938 (72.1%)
# Gaps: 31/938 ( 3.3%)
# Score: 2360.0
#
#
#=======================================
BSNT_02472___ 1 ATGGCTAACTCCAGAATCTTAAA--TGATACAGCTATAGACGGACAAATT 48
||||||.|..|.|||| |||.| |||||||||.||..|.||||||||.
BL02979___cta 1 ATGGCTGAAACAAGAA--TTACAGCTGATACAGCAATGAATGGACAAATA 48
BSNT_02472___ 49 GAAGAAACAACGGCATGGAAAGATTTTCTGTCCCTTATTAAAATAGGGAT 98
|||||.||.||.||||||||||||||.||..|||||||.|||.|.|||||
BL02979___cta 49 GAAGAGACGACAGCATGGAAAGATTTCCTCGCCCTTATCAAAGTCGGGAT 98
BSNT_02472___ 99 CGTCAATTCTAACCTCATCACGACTTTCACTGGAATGTGGCTTGC----- 143
.||..|.||.|||||.||.||.|||||.||.||.||||||||.||
BL02979___cta 99 TGTTTACTCGAACCTGATAACAACTTTTACGGGCATGTGGCTCGCTTTTT 148
BSNT_02472___ 144 ACTGCATATATCCGGTTTAAGTTTTTTAGGCAATATAAACACCGTTCTTC 193
||| |.||...|.|.||.|||.||||.||..|..|.|.|||.||..
BL02979___cta 149 ACT-----TTTCAAATCTGAGCTTTCTAGGAAACCTTGATATCGTGCTGT 193
BSNT_02472___ 194 TTACGTTAATCGGGTCTTCACTGATTATTGCGGGCTCCTGCGCGATCAAT 243
|.||.|||...|||||.||.||.||||||||.|||||.||||..|||||.
BL02979___cta 194 TCACTTTAGCGGGGTCCTCGCTTATTATTGCAGGCTCATGCGTCATCAAC 243
BSNT_02472___ 244 AACTGGTATGACCGGGACATTGACCATCTTATGGAGCGTACGAAAGTAAG 293
||||..||||||||.||.||||||||.||.|||.||||.||||.|..|||
BL02979___cta 244 AACTTTTATGACCGTGATATTGACCAGCTCATGCAGCGGACGAGAACAAG 293
BSNT_02472___ 294 ACCGACGGTTACGGGTAAAATTCAGCCGAGTCAGGCGTTATGGTCTGGAA 343
.||||||||.||.||.|||||.|||||....|||||.||.||||..||.|
BL02979___cta 294 GCCGACGGTGACTGGAAAAATCCAGCCTTCACAGGCATTGTGGTTCGGCA 343
BSNT_02472___ 344 TTTTGCTGGTTGCTTTAGGATTGATCATGCTGCTGATGAC--AACTGTCA 391
||.|||||..|||..|.||.||.||||||||||||||||| |.|||.||
BL02979___cta 344 TTCTGCTGACTGCGCTCGGTTTTATCATGCTGCTGATGACCAATCTGACA 393
BSNT_02472___ 392 TGGCTGCTGTTATCGGTTTTATCGGAGTCTTTACGTATGTTGTAT-TGTA 440
|||||.|...|.||.|||.||||.|||||||||||.| |||.| |.||
BL02979___cta 394 --GCTGCCGGAGTAGGATTTGTCGGCGTCTTTACGTACG-TGTTTCTATA 440
BSNT_02472___ 441 CACAATGTGGACGAAACGCCGCTATACGATTAACACAGTAGTAGGAAGCG 490
|||.||||||.|.||.|||||||||||..||||.||..|..|.|||||.|
BL02979___cta 441 CACGATGTGGTCAAAGCGCCGCTATACCGTTAATACGATCATCGGAAGTG 490
BSNT_02472___ 491 TTTCCGGTGCAGTGCCGCCGCTTATTGGATGGACGGCAGTGGAAGGGAAT 540
|.||.||.||.||.||.||..|.||.||||||||.||.||..||||....
BL02979___cta 491 TGTCAGGGGCTGTTCCACCTTTGATCGGATGGACCGCTGTCCAAGGTTCC 540
BSNT_02472___ 541 ATCGGTGTCGTAGCATGGGTGTTATTCATGATTTTATTTATTTGGCAGAT 590
|||||.||||..||.||||||.|.||..|.|||.|.||||||||||||||
BL02979___cta 541 ATCGGAGTCGAGGCGTGGGTGCTGTTTTTAATTATGTTTATTTGGCAGAT 590
BSNT_02472___ 591 TCCTCACTTCTTAGCATTGGCTATTAAGAAAACAGAGGATTACAGAGCTG 640
|||.|||||..|.||..|.||.|||||||||||.|||||.||||||||.|
BL02979___cta 591 TCCCCACTTTCTGGCGCTTGCGATTAAGAAAACGGAGGAATACAGAGCCG 640
BSNT_02472___ 641 CAAATATTCCGATGCTTCCTGTCGTATACGGATTTGAAGTGACAAAAAGA 690
|||||||.||||||||.|||||.|||.||||.|||||||||||.|||||.
BL02979___cta 641 CAAATATACCGATGCTGCCTGTTGTACACGGTTTTGAAGTGACGAAAAGG 690
BSNT_02472___ 691 CAAATTATTGTGTGGGTTGCGTGCCTGATGCCGCTTCCGTTTTTCCTTGG 740
||.||.||..|.|||.||||.|||.|.||||||||.|||||||||||.||
BL02979___cta 691 CAGATCATCATTTGGATTGCCTGCTTAATGCCGCTGCCGTTTTTCCTGGG 740
BSNT_02472___ 741 TAGCCTGGGTCTTCCGATTGTGATTCTCGGCTTGCTGTTAAATATCGGCT 790
..|.||.||.||.|||||.||.|||.|.||...|.||.|.||||||||||
BL02979___cta 741 CGGACTCGGACTGCCGATCGTCATTTTGGGGACGGTGCTTAATATCGGCT 790
BSNT_02472___ 791 GGCTGATTCTTGGCTTAATGGGATTCCGCTCCAAGAATATCATGAAGTGG 840
||||..||...||..|..|.||.|.|.|...|||.|||||||||||||||
BL02979___cta 791 GGCTCGTTTGCGGTCTGGTCGGTTACAGAAGCAAAAATATCATGAAGTGG 840
BSNT_02472___ 841 GCAACACAAATGTTCGTTTACTCGCTTAACTACATGACAATCTATTTCGT 890
|||||.|..|||||.||.||.||..|.||.|||.||||.||.|..|||||
BL02979___cta 841 GCAACGCTCATGTTTGTATATTCATTAAATTACTTGACCATTTTCTTCGT 890
BSNT_02472___ 891 TGCCATGGTTGTCTTGACGCTTTTCTAA---------- 918
|||||||||.||.||.||.||||| |||
BL02979___cta 891 TGCCATGGTCGTATTTACACTTTT-TAAAATTGGATAG 927
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