Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02465 and BL02973

See DNA alignment / Visit BSNT_02465 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence pep-align/BSNT_02465___ylaM.1.5803.seq
#    -bsequence pep-align/BL02973___ylaM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02465___ylaM-BL02973___ylaM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02465___ylaM-BL02973___ylaM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02465___ylaM
# 2: BL02973___ylaM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     237/309 (76.7%)
# Similarity:   276/309 (89.3%)
# Gaps:           0/309 ( 0.0%)
# Score: 1258.0
# 
#
#=======================================

BSNT_02465___      1 MVCRHNDELEALVKKAKKVTDKGEVASYIPALAKADKHDLSVAIYYSNNV     50
                     |.||||.|||..|.:||||||||:|||||||||:..:.|||.|:|:::..
BL02973___yla      1 MNCRHNKELEYFVTEAKKVTDKGKVASYIPALAELSEDDLSAAVYFTDGT     50

BSNT_02465___     51 CLSAGDVEKTFTLQSISKVLSLALVLMEYGKDKVFSYVGQEPTGDPFNSI    100
                     |:|||||||.||||||||||||||||:::|.:|||.||||||||||||||
BL02973___yla     51 CISAGDVEKAFTLQSISKVLSLALVLIDHGPEKVFHYVGQEPTGDPFNSI    100

BSNT_02465___    101 IKLETVNPSKPLNPMINAGALVVTSLIRGRTVKERLDYLLSFIRRLTNNQ    150
                     ||||||||.||||||||||||||||:|:|.|..:::..||.||::|.||:
BL02973___yla    101 IKLETVNPGKPLNPMINAGALVVTSMIKGETNADKIGRLLDFIKKLANNR    150

BSNT_02465___    151 EITYCREVAESEYSTSMINRAMCYYMKQYGIFEDDVEAVMDLYTKQCAIE    200
                     .||.|.:|||||:.|||:|||||||||::|||:.:||.|||:||||||||
BL02973___yla    151 SITVCGKVAESEFETSMVNRAMCYYMKEHGIFQAEVEDVMDVYTKQCAIE    200

BSNT_02465___    201 MNSLDLAKIGSVFALNGRHPETGEQVISKDVARICKTFMVTCGMYNASGE    250
                     |||||||||||||||||:|||||||:|.||:|||||||||||||||||||
BL02973___yla    201 MNSLDLAKIGSVFALNGKHPETGEQIIPKDIARICKTFMVTCGMYNASGE    250

BSNT_02465___    251 FAIKVGIPAKSGVSGGIMGISPYDFGIGIFGPALDEKGNSIAGVKLLEIM    300
                     ||||:||||||||||||||:|||.||||||||:||||||||||::|||::
BL02973___yla    251 FAIKIGIPAKSGVSGGIMGLSPYRFGIGIFGPSLDEKGNSIAGIRLLELL    300

BSNT_02465___    301 SEMYRLSIF    309
                     |..|.||||
BL02973___yla    301 SANYSLSIF    309


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