Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_02465 and BL02973

See Amino acid alignment / Visit BSNT_02465 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence dna-align/BSNT_02465___ylaM.1.5803.seq
#    -bsequence dna-align/BL02973___ylaM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02465___ylaM-BL02973___ylaM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02465___ylaM-BL02973___ylaM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02465___ylaM
# 2: BL02973___ylaM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 958
# Identity:     687/958 (71.7%)
# Similarity:   687/958 (71.7%)
# Gaps:          56/958 ( 5.8%)
# Score: 2368.5
# 
#
#=======================================

BSNT_02465___      1 ----ATGGTATGCCGGCATAATGATGAGCTTGAAGCCTTAGTGAAAAAGG     46
                         ||    ||||||||||||.|.|||||.|||...||.||.|.|.|.|
BL02973___yla      1 TTGAAT----TGCCGGCATAATAAGGAGCTCGAATATTTTGTCACAGAAG     46

BSNT_02465___     47 CGAAAAAAGTAACGGACAAGGGGGAGGTAGCCAGC-TATATTCCCGCCTT     95
                     ||||||||||.||||||||.||..||||.| ||.| ||.||.||.||.||
BL02973___yla     47 CGAAAAAAGTGACGGACAAAGGAAAGGTTG-CATCTTACATACCGGCTTT     95

BSNT_02465___     96 GGCAAAAGCTGAT--AAACACGACCTGTCAGTGGCGATTTATTATTCCAA    143
                     |||..||  |.||  .|..||||..|.||.|.||||.|.||.|.|.||.|
BL02973___yla     96 GGCCGAA--TTATCGGAGGACGATTTATCGGCGGCGGTCTACTTTACCGA    143

BSNT_02465___    144 TAATGTTTGTCTGTCAGCAGGTGACGTAGAAAAAACATTTACGCTTCAAA    193
                     ......||||.|.|||||.||.||.||.||||||.||||.||.||.||||
BL02973___yla    144 CGGGACTTGTATATCAGCGGGGGATGTGGAAAAAGCATTCACTCTGCAAA    193

BSNT_02465___    194 GTATATCGAAAGTCCTTTCCCTTGCTTTGGTGTTAATGGAATACGGCAAA    243
                     |.|||||.|||||..|.||.|||||..|.||..|.||.||..||||....
BL02973___yla    194 GCATATCAAAAGTATTGTCGCTTGCCCTCGTTCTGATCGATCACGGACCG    243

BSNT_02465___    244 GATAAGGTCTTTAGTTATGTTGGACAGGAGCCGACCGGAGATCCGTTTAA    293
                     ||.||.||.|||..|||.||.|||||.||||||||.||.|||||||||||
BL02973___yla    244 GAAAAAGTGTTTCATTACGTAGGACAAGAGCCGACTGGCGATCCGTTTAA    293

BSNT_02465___    294 TTCAATTATCAAGCTCGAAACAGTGAATCCAAGCAAGCCGTTAAATCCTA    343
                     .||.||.||||||||.|||||.||.||.||..|.||||||.|.|||||.|
BL02973___yla    294 CTCCATCATCAAGCTTGAAACCGTCAACCCGGGGAAGCCGCTGAATCCGA    343

BSNT_02465___    344 TGATTAATGCCGGGGCATTGGTAGTGACAAGTCTGATAAGAG----GAAG    389
                     ||||.||.||.||.||||||||.||.|||||..||||.|.||    ||.|
BL02973___yla    344 TGATAAACGCAGGAGCATTGGTGGTCACAAGCATGATTAAAGGAGAGACG    393

BSNT_02465___    390 AACGGTGA-AAGA----GAGACTTGATTATTTGCTTTCTTTTATCAGAAG    434
                     ||||.||| ||||    |||||         |||||..||||||.|.||.
BL02973___yla    394 AACGCTGATAAGATCGGGAGAC---------TGCTTGATTTTATTAAAAA    434

BSNT_02465___    435 GCTGACAAACAACCAAGAG-ATTACATACTGCCGGGAA-GTGGCTGAATC    482
                     .||..||||||||| .||| |||||....|| |||||| ||.||.|||||
BL02973___yla    435 ACTTGCAAACAACC-GGAGCATTACCGTTTG-CGGGAAGGTCGCCGAATC    482

BSNT_02465___    483 TGAAT----ACAGCACTTCAATGATTAATCGGGCAATGTGCTATTATATG    528
                     |||||    |    ||.||.|||.|.||..||||.|||||||||||.|||
BL02973___yla    483 TGAATTTGAA----ACCTCGATGGTCAACAGGGCGATGTGCTATTACATG    528

BSNT_02465___    529 AAGCAGTACGGCATTTTTGAAGATGATGTAGAAGCAGTAATGGATTTATA    578
                     ||..||.|||||||||||.|.|.|||.||.||.|..||.||||||.||||
BL02973___yla    529 AAAGAGCACGGCATTTTTCAGGCTGAGGTTGAGGATGTTATGGATGTATA    578

BSNT_02465___    579 CACGAAGCAATGCGCGATTGAGATGAACAGCTTGGATTTAGCGAAAATCG    628
                     .||.||.||.|||||.|||||.|||||||||.||||..|.||.|||||||
BL02973___yla    579 TACAAAACAGTGCGCCATTGAAATGAACAGCCTGGACCTGGCAAAAATCG    628

BSNT_02465___    629 GATCTGTATTTGCATTGAACGGCAGACATCCAGAGACTGGGGAGCAAGTC    678
                     |.|||||.|||||.||||||||||..|||||.||.||.||.||.|||.||
BL02973___yla    629 GCTCTGTTTTTGCTTTGAACGGCAAGCATCCCGAAACGGGAGAACAAATC    678

BSNT_02465___    679 ATCTCAAAAGATGTCGCTAGAATTTGCAAAACATTTATGGTGACGTGCGG    728
                     ||..|.||.|||.||||.|||||||||||.||||||||||||||.|||||
BL02973___yla    679 ATACCGAAGGATATCGCGAGAATTTGCAAGACATTTATGGTGACATGCGG    728

BSNT_02465___    729 AATGTACAATGCAAGCGGGGAATTCGCAATTAAGGTCGGAATTCCTGCGA    778
                     ||||||.|||||.|||||.|||||||||||.||..||||||||||.||.|
BL02973___yla    729 AATGTATAATGCCAGCGGCGAATTCGCAATCAAAATCGGAATTCCCGCCA    778

BSNT_02465___    779 AAAGCGGCGTATCCGGCGGGATTATGGGCATTTCGCCTTACGATTTCGGG    828
                     |||||||.||.||.||.||.||.|||||..|.||.||.|||..||||||.
BL02973___yla    779 AAAGCGGGGTTTCAGGGGGCATCATGGGGCTATCCCCATACCGTTTCGGC    828

BSNT_02465___    829 ATCGGCATATTCGGCCC--CGCATTAGACGAAAAAGGGAACAGCATTGCA    876
                     ||||||||.|||||.||  |||  |.||.|||||.||.|||||||||||.
BL02973___yla    829 ATCGGCATCTTCGGGCCTTCGC--TCGATGAAAAGGGAAACAGCATTGCC    876

BSNT_02465___    877 GGTGTAAA----GCTTTTGGAAATAATGTCTGAGATGTACAGGCTGAGTA    922
                     ||    ||    ||||||.||..||.|.||||.||..|||||..|.||.|
BL02973___yla    877 GG----AATCCGGCTTTTAGAGCTATTATCTGCGAATTACAGCTTAAGCA    922

BSNT_02465___    923 TTTTTTAA    930
                     ||||||||
BL02973___yla    923 TTTTTTAA    930


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02465 and BL02973

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
