Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02453 and BL02968

See DNA alignment / Visit BSNT_02453 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence pep-align/BSNT_02453.1.5803.seq
#    -bsequence pep-align/BL02968___ylaC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02453-BL02968___ylaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02453-BL02968___ylaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02453
# 2: BL02968___ylaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 175
# Identity:      50/175 (28.6%)
# Similarity:    72/175 (41.1%)
# Gaps:          76/175 (43.4%)
# Score: 249.0
# 
#
#=======================================

BSNT_02453         0 --------------------------------------------------      0
                                                                       
BL02968___yla      1 MAHNNKQTIEELYREYYHDIMYYLYRRTHQLETAKDLAQDTFLKAFAGLE     50

BSNT_02453         1 ----------------------MVPKGCQYQFTEISKNEGLTQTTYDQPE     28
                                           ...|..:.||::::....:.|.|::.||
BL02968___yla     51 SFRGHSSIKTWLYTIAHHTFINWYRKDKKIQFSDVAACGDMEQHTFEMPE    100

BSNT_02453        29 QYLSRTVKSETLRQELLKLKDQHQSVLILREFQELSYEEIAEILGWSLSK     78
                     ::|:..:..|.|:..:.:||:.:|:|||||||||||||||||:|.|.|||
BL02968___yla    101 RHLANAIMQEELKHHIDRLKEDYQTVLILREFQELSYEEIAEVLNWKLSK    150

BSNT_02453        79 VKTTLHRARLELKKNMTKSREEERI    103
                     |||.||||||||||:: :.||.   
BL02968___yla    151 VKTNLHRARLELKKSL-EGREV---    171


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