Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02453 and BL02968
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_02453.1.5803.seq
# -bsequence dna-align/BL02968___ylaC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02453-BL02968___ylaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02453-BL02968___ylaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02453
# 2: BL02968___ylaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 569
# Identity: 197/569 (34.6%)
# Similarity: 197/569 (34.6%)
# Gaps: 310/569 (54.5%)
# Score: 468.0
#
#
#=======================================
BSNT_02453 0 -------------------------------------------------- 0
BL02968___yla 1 ATGGCTCACAATAATAAACAGACGATTGAAGAACTGTACAGGGAATATTA 50
BSNT_02453 0 -------------------------------------------------- 0
BL02968___yla 51 TCATGACATCATGTACTATTTGTACAGGCGAACCCATCAGCTTGAGACGG 100
BSNT_02453 0 -------------------------------------------------- 0
BL02968___yla 101 CGAAAGACCTGGCGCAGGATACGTTTCTAAAAGCTTTTGCGGGCCTGGAG 150
BSNT_02453 0 -------------------------------------------------- 0
BL02968___yla 151 TCTTTCAGGGGCCATTCCTCGATCAAAACATGGCTGTATACGATCGCACA 200
BSNT_02453 1 ---------------TTGGTACCGAAGGGATGTCAATA-CCAATTTACTG 34
.||||||.|||..|||...||.| |||||||.|.|
BL02968___yla 201 TCATACGTTTATCAACTGGTACAGAAAAGATAAAAAAATCCAATTTTCCG 250
BSNT_02453 35 AAAT---------CAGCAAAAATGA-AGGGTTAAC-GCAAACAACTTATG 73
|..| |.|| || |.|| ||| |||.||| |.||
BL02968___yla 251 ACGTGGCGGCCTGCGGC------GATATGG--AACAGCACACA---TTTG 289
BSNT_02453 74 ACCAGCCTGAACAGTATCTGTCACGGACG----------GTGAAAAGC-G 112
|...||||||.|...||.||.|| .||| | |||.||| |
BL02968___yla 290 AAATGCCTGAGCGCCATTTGGCA--AACGCCATAATGCAG-GAAGAGCTG 336
BSNT_02453 113 AA-----ACACTG--CGGCAGGAGCTCCTGAAGTTAAAAGATCAGCA-TC 154
|| |||.|| ||| ||||| |.|||||.|.|| .|
BL02968___yla 337 AAACATCACATTGACCGG---------CTGAA---AGAAGATTACCAGAC 374
BSNT_02453 155 AATCCGTTTTGATTTTAAGAGAATTCCAAGAGCTTTCTTATGAAGAAATC 204
..||| |.|||||||||||.||.||||||||.||.||.||.|||||.
BL02968___yla 375 TGTCC----TCATTTTAAGAGAGTTTCAAGAGCTGTCATACGAGGAAATA 420
BSNT_02453 205 GCTGAGATATTAG----GA--TGGAGTCTTTCTAAGGTGAAAACCACAT- 247
||.|| || || ||||..||.||.|||||.||||||| ||
BL02968___yla 421 GCGGA------AGTGCTGAATTGGAAACTGTCAAAGGTAAAAACCA-ATC 463
BSNT_02453 248 TGCACCGGGCTAGATTAGAGCTAAAGAAAAACATGACGAAAAGTAGAGAG 297
|.||||||||..|..|.|||||.||.||||.|.| |.||.|.||.|||
BL02968___yla 464 TTCACCGGGCCCGCCTGGAGCTGAAAAAAAGCTT---GGAAGGCAGGGAG 510
BSNT_02453 298 G----AGGAGCGGATATGA 312
| |
BL02968___yla 511 GTTTAA------------- 516
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