Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05940 and BL02960

See DNA alignment / Visit BSNT_05940 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:01
# Commandline: needle
#    -asequence pep-align/BSNT_05940___yxkH.1.5803.seq
#    -bsequence pep-align/BL02960___yxkH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05940___yxkH-BL02960___yxkH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05940___yxkH-BL02960___yxkH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05940___yxkH
# 2: BL02960___yxkH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     179/285 (62.8%)
# Similarity:   212/285 (74.4%)
# Gaps:          12/285 ( 4.2%)
# Score: 930.5
# 
#
#=======================================

BSNT_05940___      1 ---MKRLFLSIFLLGSCLALAACADQEANAEQPMPKAEQKKPEKKAVQ--     45
                        .|.|.:...|:|   .|..|:..|...|:   |.|....:|.|.|  
BL02960___yxk      1 MKKTKMLLVLSMLMG---VLYGCSGHETKGEE---KTEPNTAQKAAKQSK     44

BSNT_05940___     46 VQKKEDDTSAWIKTEKPAKLPILMYHSISSGNSLRVPKKEFEAHMKWLHD     95
                     .|.:.|.:|.|:|.:.||::|||||||||||||||||:.||..|||||.|
BL02960___yxk     45 QQAEHDPSSKWVKVKSPARIPILMYHSISSGNSLRVPEGEFRGHMKWLKD     94

BSNT_05940___     96 NGYQTLTPKEAYLMLTQDKKPSEKCVLITFDDGYTDNYQDAYPVLKKYGM    145
                     |||.||||:|||::|||||.||:||||||||||||||::.|||:||.|||
BL02960___yxk     95 NGYYTLTPEEAYIVLTQDKMPSDKCVLITFDDGYTDNFEKAYPILKGYGM    144

BSNT_05940___    146 KATIFMIGKSIGHRHHLTEDQMKEMAQHGISIESHTIDHVELNGLTPQQQ    195
                     ||||||||||:|.::||||.||.||.::||||:||||.|||||||.|.||
BL02960___yxk    145 KATIFMIGKSVGGKNHLTEKQMNEMRRNGISIQSHTIHHVELNGLAPGQQ    194

BSNT_05940___    196 QSEMADSKKLFDHMFHQQTTIISYPVGRYNEETLKAAEKTGYQMGVTTEP    245
                     ..||..||.|||.||.|.|.::|||||||||:|||.|::.||||.|||||
BL02960___yxk    195 LDEMTRSKALFDRMFSQNTVMLSYPVGRYNEDTLKLAKQAGYQMAVTTEP    244

BSNT_05940___    246 GAASRDQGMYALHRVRVSPGMSGSAFGAYIESMK-    279
                     ||||||||||||||||:|||||..|||..:|..: 
BL02960___yxk    245 GAASRDQGMYALHRVRISPGMSPDAFGKMVEHSRQ    279


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