Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06079 and BL02956
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:05
# Commandline: needle
# -asequence pep-align/BSNT_06079.1.5803.seq
# -bsequence pep-align/BL02956___yxdL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06079-BL02956___yxdL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06079-BL02956___yxdL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06079
# 2: BL02956___yxdL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity: 118/258 (45.7%)
# Similarity: 128/258 (49.6%)
# Gaps: 120/258 (46.5%)
# Score: 596.0
#
#
#=======================================
BSNT_06079 0 -------------------------------------------------- 0
BL02956___yxd 1 MTTNMLVVKNINKTYKGQVSHQALKDISFNVEESEFTAIMGPSGSGKTTL 50
BSNT_06079 0 -------------------------------------------------- 0
BL02956___yxd 51 LNIISTIDRPDSGDILIRGEDPHHLKRAKLAHFRRRQLGFVFQDFNLLDT 100
BSNT_06079 1 --------------------MEEKLQGIAAKLGIENLLNKRTFEVSGGQR 30
||:|||.||.|||||.|||||||||||||:
BL02956___yxd 101 LTIGENIMLPLTLENQPLSVMEDKLQAIAEKLGIEQLLNKRTFEVSGGQK 150
BSNT_06079 31 QRAAIARAVIHKPSLILADEPTGNLDSKASKDVMETMQSLNQDDHVTALM 80
|||||||||||:|:|||||||||||||:||||||||||.||::|:.|.||
BL02956___yxd 151 QRAAIARAVIHQPALILADEPTGNLDSQASKDVMETMQHLNENDNATILM 200
BSNT_06079 81 DTHDPVAASYCRRVIFIKDGELFNEIYRGENRQVFYEQILDVLSMLGGNA 130
.|||||||||||||||||||.||||||||.|||||||:||:||||||||.
BL02956___yxd 201 VTHDPVAASYCRRVIFIKDGTLFNEIYRGANRQVFYEEILNVLSMLGGNT 250
BSNT_06079 131 NDLSSVRL 138
||||||||
BL02956___yxd 251 NDLSSVRL 258
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