Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06079 and BL02956
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:05
# Commandline: needle
# -asequence dna-align/BSNT_06079.1.5803.seq
# -bsequence dna-align/BL02956___yxdL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06079-BL02956___yxdL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06079-BL02956___yxdL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06079
# 2: BL02956___yxdL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 780
# Identity: 339/780 (43.5%)
# Similarity: 339/780 (43.5%)
# Gaps: 366/780 (46.9%)
# Score: 1354.0
#
#
#=======================================
BSNT_06079 0 -------------------------------------------------- 0
BL02956___yxd 1 ATGACAACAAATATGCTGGTCGTTAAAAACATCAATAAAACATATAAAGG 50
BSNT_06079 0 -------------------------------------------------- 0
BL02956___yxd 51 ACAAGTCTCCCATCAGGCTTTAAAAGATATTTCATTCAATGTCGAGGAAA 100
BSNT_06079 0 -------------------------------------------------- 0
BL02956___yxd 101 GTGAGTTCACGGCGATCATGGGGCCGTCCGGTTCTGGAAAAACGACGCTT 150
BSNT_06079 0 -------------------------------------------------- 0
BL02956___yxd 151 CTCAATATCATTTCGACGATTGACCGCCCGGATTCCGGCGACATTTTAAT 200
BSNT_06079 0 -------------------------------------------------- 0
BL02956___yxd 201 TCGCGGAGAAGACCCGCATCATTTAAAAAGGGCGAAGCTTGCCCACTTTC 250
BSNT_06079 0 -------------------------------------------------- 0
BL02956___yxd 251 GCCGCAGGCAGCTCGGGTTCGTATTCCAGGATTTTAATTTGCTGGATACA 300
BSNT_06079 0 -------------------------------------------------- 0
BL02956___yxd 301 CTGACGATCGGCGAAAACATCATGCTGCCGTTAACGCTTGAAAATCAACC 350
BSNT_06079 1 ----------ATGGAAGAAAAACTGCAAGGC-ATCGCGGCAAAGCTCGGA 39
||||||||.|||||.| |||| ||.||.|.|||.|||||.
BL02956___yxd 351 GCTTTCCGTCATGGAAGATAAACTTC-AGGCGATTGCTGAAAAACTCGGC 399
BSNT_06079 40 ATCGAAAACCTGCTCAACAAACGGACGTTTGAAGTATCCGGAGGACAGCG 89
||.|||.|.||..|.||||||||||||||||||||||||||.|||||...
BL02956___yxd 400 ATTGAACAACTTTTGAACAAACGGACGTTTGAAGTATCCGGCGGACAAAA 449
BSNT_06079 90 CCAGCGTGCCGCCATCGCAAGAGCGGTCATTCATAAGCCGTCACTCATCC 139
.|||||.||.||||||||||||||.|||||||||.||||..|.|||||||
BL02956___yxd 450 GCAGCGGGCGGCCATCGCAAGAGCCGTCATTCATCAGCCCGCCCTCATCC 499
BSNT_06079 140 TGGCCGATGAACCGACGGGCAACCTTGATTCCAAAGCGTCAAAAGACGTC 189
|.|||||.||||||||.||.|||||.|||||..|.||.|||||||||||.
BL02956___yxd 500 TCGCCGACGAACCGACAGGAAACCTCGATTCGCAGGCATCAAAAGACGTG 549
BSNT_06079 190 ATGGAAACGATGCAGAGCCTGAATCAGGATGATCATGTCACGGCTTTGAT 239
|||||.|||||||||...||.|||.|..|.||..|||.||||...||.||
BL02956___yxd 550 ATGGAGACGATGCAGCATCTTAATGAAAACGACAATGCCACGATATTAAT 599
BSNT_06079 240 GGATACCCACGATCCTGTTGCGGCAAGCTACTGCCGCCGCGTCATCTTTA 289
||..||.|||||.||.|||||.||||||||.|||||.||||||||.||||
BL02956___yxd 600 GGTCACGCACGACCCAGTTGCCGCAAGCTATTGCCGTCGCGTCATTTTTA 649
BSNT_06079 290 TAAAAGACGGCGAAC--TATTTAATGAGATTTACCGCGGGGAAAACCGCC 337
|.||||||| |||| ||||.|||||.|||||||||||.|..|||||||
BL02956___yxd 650 TTAAAGACG--GAACATTATTCAATGAAATTTACCGCGGCGCCAACCGCC 697
BSNT_06079 338 AAGTCTTTTATGAACAAATTCTCGATGTGCTGTCTATGCTGGGGGGAAAC 387
||||.|||||||||.|.|||||..|||||||||||||||||||.|||||.
BL02956___yxd 698 AAGTATTTTATGAAGAGATTCTGAATGTGCTGTCTATGCTGGGAGGAAAT 747
BSNT_06079 388 GCAAATGACCTTTCTTCAGTTCGCTTATAA 417
.|.|||||||||||||||||||||||||||
BL02956___yxd 748 ACCAATGACCTTTCTTCAGTTCGCTTATAA 777
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