Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06079 and BL02956

See Amino acid alignment / Visit BSNT_06079 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:05
# Commandline: needle
#    -asequence dna-align/BSNT_06079.1.5803.seq
#    -bsequence dna-align/BL02956___yxdL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06079-BL02956___yxdL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06079-BL02956___yxdL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06079
# 2: BL02956___yxdL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 780
# Identity:     339/780 (43.5%)
# Similarity:   339/780 (43.5%)
# Gaps:         366/780 (46.9%)
# Score: 1354.0
# 
#
#=======================================

BSNT_06079         0 --------------------------------------------------      0
                                                                       
BL02956___yxd      1 ATGACAACAAATATGCTGGTCGTTAAAAACATCAATAAAACATATAAAGG     50

BSNT_06079         0 --------------------------------------------------      0
                                                                       
BL02956___yxd     51 ACAAGTCTCCCATCAGGCTTTAAAAGATATTTCATTCAATGTCGAGGAAA    100

BSNT_06079         0 --------------------------------------------------      0
                                                                       
BL02956___yxd    101 GTGAGTTCACGGCGATCATGGGGCCGTCCGGTTCTGGAAAAACGACGCTT    150

BSNT_06079         0 --------------------------------------------------      0
                                                                       
BL02956___yxd    151 CTCAATATCATTTCGACGATTGACCGCCCGGATTCCGGCGACATTTTAAT    200

BSNT_06079         0 --------------------------------------------------      0
                                                                       
BL02956___yxd    201 TCGCGGAGAAGACCCGCATCATTTAAAAAGGGCGAAGCTTGCCCACTTTC    250

BSNT_06079         0 --------------------------------------------------      0
                                                                       
BL02956___yxd    251 GCCGCAGGCAGCTCGGGTTCGTATTCCAGGATTTTAATTTGCTGGATACA    300

BSNT_06079         0 --------------------------------------------------      0
                                                                       
BL02956___yxd    301 CTGACGATCGGCGAAAACATCATGCTGCCGTTAACGCTTGAAAATCAACC    350

BSNT_06079         1 ----------ATGGAAGAAAAACTGCAAGGC-ATCGCGGCAAAGCTCGGA     39
                               ||||||||.|||||.| |||| ||.||.|.|||.|||||.
BL02956___yxd    351 GCTTTCCGTCATGGAAGATAAACTTC-AGGCGATTGCTGAAAAACTCGGC    399

BSNT_06079        40 ATCGAAAACCTGCTCAACAAACGGACGTTTGAAGTATCCGGAGGACAGCG     89
                     ||.|||.|.||..|.||||||||||||||||||||||||||.|||||...
BL02956___yxd    400 ATTGAACAACTTTTGAACAAACGGACGTTTGAAGTATCCGGCGGACAAAA    449

BSNT_06079        90 CCAGCGTGCCGCCATCGCAAGAGCGGTCATTCATAAGCCGTCACTCATCC    139
                     .|||||.||.||||||||||||||.|||||||||.||||..|.|||||||
BL02956___yxd    450 GCAGCGGGCGGCCATCGCAAGAGCCGTCATTCATCAGCCCGCCCTCATCC    499

BSNT_06079       140 TGGCCGATGAACCGACGGGCAACCTTGATTCCAAAGCGTCAAAAGACGTC    189
                     |.|||||.||||||||.||.|||||.|||||..|.||.|||||||||||.
BL02956___yxd    500 TCGCCGACGAACCGACAGGAAACCTCGATTCGCAGGCATCAAAAGACGTG    549

BSNT_06079       190 ATGGAAACGATGCAGAGCCTGAATCAGGATGATCATGTCACGGCTTTGAT    239
                     |||||.|||||||||...||.|||.|..|.||..|||.||||...||.||
BL02956___yxd    550 ATGGAGACGATGCAGCATCTTAATGAAAACGACAATGCCACGATATTAAT    599

BSNT_06079       240 GGATACCCACGATCCTGTTGCGGCAAGCTACTGCCGCCGCGTCATCTTTA    289
                     ||..||.|||||.||.|||||.||||||||.|||||.||||||||.||||
BL02956___yxd    600 GGTCACGCACGACCCAGTTGCCGCAAGCTATTGCCGTCGCGTCATTTTTA    649

BSNT_06079       290 TAAAAGACGGCGAAC--TATTTAATGAGATTTACCGCGGGGAAAACCGCC    337
                     |.|||||||  ||||  ||||.|||||.|||||||||||.|..|||||||
BL02956___yxd    650 TTAAAGACG--GAACATTATTCAATGAAATTTACCGCGGCGCCAACCGCC    697

BSNT_06079       338 AAGTCTTTTATGAACAAATTCTCGATGTGCTGTCTATGCTGGGGGGAAAC    387
                     ||||.|||||||||.|.|||||..|||||||||||||||||||.|||||.
BL02956___yxd    698 AAGTATTTTATGAAGAGATTCTGAATGTGCTGTCTATGCTGGGAGGAAAT    747

BSNT_06079       388 GCAAATGACCTTTCTTCAGTTCGCTTATAA    417
                     .|.|||||||||||||||||||||||||||
BL02956___yxd    748 ACCAATGACCTTTCTTCAGTTCGCTTATAA    777


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