Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02988 and BL02953

See DNA alignment / Visit BSNT_02988 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:40
# Commandline: needle
#    -asequence pep-align/BSNT_02988___yneR.1.5803.seq
#    -bsequence pep-align/BL02953___yneR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02988___yneR-BL02953___yneR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02988___yneR-BL02953___yneR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02988___yneR
# 2: BL02953___yneR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 95
# Identity:      75/95 (78.9%)
# Similarity:    86/95 (90.5%)
# Gaps:           0/95 ( 0.0%)
# Score: 424.0
# 
#
#=======================================

BSNT_02988___      1 MNMTINEDALNWYKEELDLESGDQVRFFVRYGGCSNVQKGFSLGVAKDAP     50
                     ||:.|||:||.|||.||||:.||||||||||||||||||||||||:||.|
BL02953___yne      1 MNLKINEEALKWYKNELDLKEGDQVRFFVRYGGCSNVQKGFSLGVSKDEP     50

BSNT_02988___     51 QEAGVTAEADGITFFIEESDLWYFDNHDLLVSYSEDADEPVFEYQ     95
                     |:.||:||.||||||:||||:||||.|||||:|:|.|:|||||||
BL02953___yne     51 QQIGVSAEKDGITFFVEESDVWYFDGHDLLVTYNESAEEPVFEYQ     95


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.