Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02972 and BL02950

See DNA alignment / Visit BSNT_02972 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence pep-align/BSNT_02972___cotM.1.5803.seq
#    -bsequence pep-align/BL02950___cotM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02972___cotM-BL02950___cotM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02972___cotM-BL02950___cotM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02972___cotM
# 2: BL02950___cotM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 137
# Identity:      68/137 (49.6%)
# Similarity:    88/137 (64.2%)
# Gaps:          15/137 (10.9%)
# Score: 346.5
# 
#
#=======================================

BSNT_02972___      1 MNHSKRNDANDFDSMDEWLRQFFEDPFAWYDETLPIDLYETSQQYIIEAD     50
                     |.::||.|:.|||.  ||::||.:|||..|||||||||||||.:||||||
BL02950___cot      1 MTNTKRFDSADFDK--EWMKQFVDDPFLLYDETLPIDLYETSTEYIIEAD     48

BSNT_02972___     51 LTFLQPTQVTVTLSGCEFILTVKSSGQTFEKQMMLPFYFNDKNIQAECEN    100
                     |:.|....:.:|.||.:|.|.||:..|.:||.:||||:.|||.|:|||||
BL02950___cot     49 LSHLNVRHLDLTFSGYDFKLAVKTDEQLYEKSLMLPFFLNDKQIEAECEN     98

BSNT_02972___    101 QILTVAVNKE-TEDGSSFSLQFPLS------------    124
                     .||.|.:||| ::|..|.|:..|..            
BL02950___cot     99 NILAVKINKESSKDDISLSINIPFISNLHNKQNPDSA    135


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.