Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02981 and BL02943

See DNA alignment / Visit BSNT_02981 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:40
# Commandline: needle
#    -asequence pep-align/BSNT_02981___sspN.1.5803.seq
#    -bsequence pep-align/BL02943___sspN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02981___sspN-BL02943___sspN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02981___sspN-BL02943___sspN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02981___sspN
# 2: BL02943___sspN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 48
# Identity:      31/48 (64.6%)
# Similarity:    38/48 (79.2%)
# Gaps:           1/48 ( 2.1%)
# Score: 166.0
# 
#
#=======================================

BSNT_02981___      1 MGNNKKNGQPQYAPSHLGTKPVKYKANKGEKMHDTSGQRPIIMQTKGE     48
                      ...:.:.|.::||||||||||:||.|||:||||.||:.|||||||||
BL02943___ssp      1 -MPREHDKQSKFAPSHLGTKPVEYKRNKGKKMHDKSGETPIIMQTKGE     47


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