Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02981 and BL02943

See Amino acid alignment / Visit BSNT_02981 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:40
# Commandline: needle
#    -asequence dna-align/BSNT_02981___sspN.1.5803.seq
#    -bsequence dna-align/BL02943___sspN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02981___sspN-BL02943___sspN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02981___sspN-BL02943___sspN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02981___sspN
# 2: BL02943___sspN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     115/154 (74.7%)
# Similarity:   115/154 (74.7%)
# Gaps:          17/154 (11.0%)
# Score: 402.5
# 
#
#=======================================

BSNT_02981___      1 ATG-GGAAACAACAAGAAAAACGGTCAGCCTCAATATGCTCCAAGCCA-C     48
                     ||| .||.|.||||.||.|||    |||.||.|||.|||.||.||||| |
BL02943___ssp      1 ATGCCGAGAGAACACGACAAA----CAGTCTAAATTTGCCCCGAGCCATC     46

BSNT_02981___     49 TTGGGTACAAAGCCTGTAAAATATAAAGC-CAATAAAGGGGAAAAAATGC     97
                     ||||| |||||.||.|||.||||| |||| |||.|||||..||||.||||
BL02943___ssp     47 TTGGG-ACAAAACCGGTAGAATAT-AAGCGCAACAAAGGAAAAAAGATGC     94

BSNT_02981___     98 ATGATACTTCAGG----ACAGCGGCCGATTATCATGCAGACAAAAGGCGA    143
                     ||||||..|||||    |||    |||||.||.|||||||||||||||||
BL02943___ssp     95 ATGATAAATCAGGAGAAACA----CCGATCATTATGCAGACAAAAGGCGA    140

BSNT_02981___    144 GTAG    147
                     |||.
BL02943___ssp    141 GTAA    144


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