Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02981 and BL02943
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:40
# Commandline: needle
# -asequence dna-align/BSNT_02981___sspN.1.5803.seq
# -bsequence dna-align/BL02943___sspN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02981___sspN-BL02943___sspN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02981___sspN-BL02943___sspN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02981___sspN
# 2: BL02943___sspN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity: 115/154 (74.7%)
# Similarity: 115/154 (74.7%)
# Gaps: 17/154 (11.0%)
# Score: 402.5
#
#
#=======================================
BSNT_02981___ 1 ATG-GGAAACAACAAGAAAAACGGTCAGCCTCAATATGCTCCAAGCCA-C 48
||| .||.|.||||.||.||| |||.||.|||.|||.||.||||| |
BL02943___ssp 1 ATGCCGAGAGAACACGACAAA----CAGTCTAAATTTGCCCCGAGCCATC 46
BSNT_02981___ 49 TTGGGTACAAAGCCTGTAAAATATAAAGC-CAATAAAGGGGAAAAAATGC 97
||||| |||||.||.|||.||||| |||| |||.|||||..||||.||||
BL02943___ssp 47 TTGGG-ACAAAACCGGTAGAATAT-AAGCGCAACAAAGGAAAAAAGATGC 94
BSNT_02981___ 98 ATGATACTTCAGG----ACAGCGGCCGATTATCATGCAGACAAAAGGCGA 143
||||||..||||| ||| |||||.||.|||||||||||||||||
BL02943___ssp 95 ATGATAAATCAGGAGAAACA----CCGATCATTATGCAGACAAAAGGCGA 140
BSNT_02981___ 144 GTAG 147
|||.
BL02943___ssp 141 GTAA 144
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