Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02969 and BL02939

See DNA alignment / Visit BSNT_02969 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence pep-align/BSNT_02969___yneJ.1.5803.seq
#    -bsequence pep-align/BL02939___ccdC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02969___yneJ-BL02939___ccdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02969___yneJ-BL02939___ccdC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02969___yneJ
# 2: BL02939___ccdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 161
# Identity:     129/161 (80.1%)
# Similarity:   152/161 (94.4%)
# Gaps:           1/161 ( 0.6%)
# Score: 652.0
# 
#
#=======================================

BSNT_02969___      1 MMIIVSSIIAVLMAVAVMVVRIKSSDKPVSPKKIILPPIFMSTGALMFLF     50
                     |||:||||:|::|||.||.||||||:||.:.|||||||||||||||||||
BL02939___ccd      1 MMIVVSSILAIVMAVIVMAVRIKSSEKPATAKKIILPPIFMSTGALMFLF     50

BSNT_02969___     51 PVFWVTGAEFLEAFTLGVIFSIFLIKTSKFEIKNNEIYMKRSKAFVFILV    100
                     |||.|||||||||.|:|:||||||||||||||::::||:||||:|||||:
BL02939___ccd     51 PVFHVTGAEFLEALTVGMIFSIFLIKTSKFEIRDDKIYIKRSKSFVFILI    100

BSNT_02969___    101 GLLVIRIVMKSILSTSIDYGALSGMFWILAFGMIVPWRIAMYLSYRKLHN    150
                     .||||||||||||||:||||||||||||||||||||||||||||:|||.:
BL02939___ccd    101 ALLVIRIVMKSILSTTIDYGALSGMFWILAFGMIVPWRIAMYLSFRKLSS    150

BSNT_02969___    151 ELQSSN-IQMN    160
                     ::::|| ||:|
BL02939___ccd    151 QIEASNHIQVN    161


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