Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02969 and BL02939
See
Amino acid alignment /
Visit
BSNT_02969 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence dna-align/BSNT_02969___yneJ.1.5803.seq
# -bsequence dna-align/BL02939___ccdC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02969___yneJ-BL02939___ccdC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02969___yneJ-BL02939___ccdC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02969___yneJ
# 2: BL02939___ccdC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 493
# Identity: 363/493 (73.6%)
# Similarity: 363/493 (73.6%)
# Gaps: 17/493 ( 3.4%)
# Score: 1288.0
#
#
#=======================================
BSNT_02969___ 1 ATGATGATTATAGTTTCATCGATTATTGCTGTGTTAATGGCTGTAGCTGT 50
||||||||..|.||||||||.||..|||||.|..|.|||||.||...|||
BL02939___ccd 1 ATGATGATCGTCGTTTCATCTATACTTGCTATCGTGATGGCCGTCATTGT 50
BSNT_02969___ 51 GATGGTGGTCAGAATAAAGTCCTCTGACAAGCCTGTTTCACCAAAAAAAA 100
.||||..||||||||.|||||.|||||.||.||.|.|.|..|.|||||||
BL02939___ccd 51 CATGGCTGTCAGAATCAAGTCATCTGAAAAACCGGCTACGGCCAAAAAAA 100
BSNT_02969___ 101 TCATTCTTCCGCCGATTTTTATGAGTACGGGAGCGTTAATGTTTTTATTT 150
|.||.||.||.||||||||||||||.||.||.||..|.||||||||||||
BL02939___ccd 101 TTATACTGCCTCCGATTTTTATGAGCACCGGTGCTCTCATGTTTTTATTT 150
BSNT_02969___ 151 CCGGTATTTTGGGTAACTGGAGCAGAGTTTTTGGAAGCATTCACTTTAGG 200
|||||.||....|||||.||.||.||.|||||||||||..||||..|.||
BL02939___ccd 151 CCGGTGTTCCACGTAACCGGTGCTGAATTTTTGGAAGCTCTCACCGTGGG 200
BSNT_02969___ 201 TGTGATTTTCTCTATTTTTCTAATCAAAACTTCTAAGTTCGAAATTAAAA 250
..||||.||.||||||||..||||.|||||.||.||.||.|||||.....
BL02939___ccd 201 CATGATCTTTTCTATTTTCTTAATTAAAACCTCAAAATTTGAAATCCGCG 250
BSNT_02969___ 251 ATAATGAAATTTACATGAAACGCTCTAAAGCATTTGTTTTTATATTAGTC 300
||.||.||||.||.||.|||||.||.|||.|.|||||.|||||.|||.|.
BL02939___ccd 251 ATGATAAAATCTATATTAAACGGTCCAAATCGTTTGTGTTTATTTTAATT 300
BSNT_02969___ 301 GGTCTTTTGGTGATCAGAATCGTGATGAA-ATCGATCTTGAGCACATCAA 349
|..||..|.||.|||.|.||||||||||| |.| ||.||.||||||.|.|
BL02939___ccd 301 GCGCTGCTCGTCATCCGGATCGTGATGAAGAGC-ATATTAAGCACAACGA 349
BSNT_02969___ 350 TTGATTATGGTGCACTGAGCGGAATGTTTTGGATTCTGGCTTTCGGTATG 399
|.|||||.||.|||||||||||||||||||||||||||||||||||.|||
BL02939___ccd 350 TCGATTACGGCGCACTGAGCGGAATGTTTTGGATTCTGGCTTTCGGGATG 399
BSNT_02969___ 400 ATTGTGCCTTGGAGAATCGCCATGTATTTATCATATCGAAAAC-TTCATA 448
||.||.||||||.|.||.||||||||||||||.|.|.||||.| ||||
BL02939___ccd 400 ATCGTTCCTTGGCGGATTGCCATGTATTTATCGTTTAGAAAGCTTTCA-- 447
BSNT_02969___ 449 ACGAGC-----TGCAGTCATCTAAT---ATTCAAATGAATTAA 483
||| ||.|| |.||.||| ||.||..|.||||||
BL02939___ccd 448 ---AGCCAGATTGAAG-CGTCAAATCACATACAGGTCAATTAA 486
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.