Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02968 and BL02938

See DNA alignment / Visit BSNT_02968 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence pep-align/BSNT_02968___yneI.1.5803.seq
#    -bsequence pep-align/BL02938___ccdB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02968___yneI-BL02938___ccdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02968___yneI-BL02938___ccdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02968___yneI
# 2: BL02938___ccdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:      86/123 (69.9%)
# Similarity:   104/123 (84.6%)
# Gaps:           3/123 ( 2.4%)
# Score: 437.0
# 
#
#=======================================

BSNT_02968___      1 MTRVLVVDDAKFMRVKIREILEEANYIIAGEAADGEQAADLYKKLRPDLV     50
                     |||||:||||||||.|||||||..:..:||||.:||:|..||::|:||||
BL02938___ccd      1 MTRVLIVDDAKFMRDKIREILETEDLQVAGEAENGEEAVLLYQELQPDLV     50

BSNT_02968___     51 TMDITMPVKNGIKALRDILTFDPKAKVIMCTAMRQQRIVTEAIELGAKDF    100
                     .|||||||||||:||:|::..:||.||||||||||:|||.||||.|||||
BL02938___ccd     51 IMDITMPVKNGIEALKDMIQLNPKVKVIMCTAMRQKRIVVEAIEAGAKDF    100

BSNT_02968___    101 IVKPFEETKVLEAVSRVMGH---    120
                     ||||||||||:||:..|:|:   
BL02938___ccd    101 IVKPFEETKVVEAIRHVLGNACS    123


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