Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02968 and BL02938
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence dna-align/BSNT_02968___yneI.1.5803.seq
# -bsequence dna-align/BL02938___ccdB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02968___yneI-BL02938___ccdB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02968___yneI-BL02938___ccdB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02968___yneI
# 2: BL02938___ccdB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 394
# Identity: 259/394 (65.7%)
# Similarity: 259/394 (65.7%)
# Gaps: 53/394 (13.5%)
# Score: 814.0
#
#
#=======================================
BSNT_02968___ 1 ATGACAAGAGTTTTAGTTGTAGACGACGCCAAGTTCATGAGAGTGAAAAT 50
||||||||.||||||.||||.||.||.||.||.||.|||||||..|||||
BL02938___ccd 1 ATGACAAGGGTTTTAATTGTTGATGATGCAAAATTTATGAGAGATAAAAT 50
BSNT_02968___ 51 CAGAGAGAT-CTTGGAAGAGGCAAATTACATAATCGCAGGCGAAGCGGCG 99
.|||||.|| ||||.||.||...|.||.|| |.||||.||.|||||.|.|
BL02938___ccd 51 TAGAGAAATACTTGAAACAGAAGACTTGCA-AGTCGCGGGTGAAGCCGAG 99
BSNT_02968___ 100 GACGGTGAACAAGCAGCTGACCTGTATAAAAAACTGCGCCCGGACCTTGT 149
.||||.|||.||||.|.|...||.|||.||.|.||||..||||||.|.||
BL02938___ccd 100 AACGGGGAAGAAGCTGTTTTGCTTTATCAAGAGCTGCAGCCGGACTTGGT 149
BSNT_02968___ 150 GACAATGGATATTACAATGCCGGTGAAAAACGGCATAAAAGCGCTTCGT- 198
.|..|||||||||||.|||||.|||||||||||.|||.|| |||| |
BL02938___ccd 150 TATCATGGATATTACGATGCCTGTGAAAAACGGGATAGAA--GCTT--TA 195
BSNT_02968___ 199 ---GATAT-------CTTAACCTTTGATCCTAAAGCGAAGGTCATCATGT 238
||||| ||.||| ||.||||.|||.||.|||||||
BL02938___ccd 196 AAGGATATGATCCAGCTGAAC-------CCGAAAGTGAAAGTGATCATGT 238
BSNT_02968___ 239 GCACCGCCATGCGCCAGCAAA---GAATTGTAACG--GAAGCAATTG-AG 282
|.||.|||||||| ||||| |.||.|| || ||.||.||.| ||
BL02938___ccd 239 GTACGGCCATGCG---GCAAAAGCGGATCGT--CGTTGAGGCGATCGAAG 283
BSNT_02968___ 283 CTGGGGGCAAAGGATTTTATTGTTAAGCCGTTTGAGGAAACAAAAGTGCT 332
| .||.||.|||||.||.||.||.|||||.||.||||||||.|||||..|
BL02938___ccd 284 C-CGGAGCCAAGGACTTCATCGTCAAGCCTTTCGAGGAAACGAAAGTCGT 332
BSNT_02968___ 333 GGAAGCTGTAAGCCGCGTTATGGGACATTAA------------- 363
.|||||..|..|.|..||..|.||| ||
BL02938___ccd 333 CGAAGCGATTCGGCATGTGCTCGGA----AATGCTTGCAGCTGA 372
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