Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02967 and BL02937
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence pep-align/BSNT_02967___ccdA.1.5803.seq
# -bsequence pep-align/BL02937___ccdA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02967___ccdA-BL02937___ccdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02967___ccdA-BL02937___ccdA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02967___ccdA
# 2: BL02937___ccdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 235
# Identity: 173/235 (73.6%)
# Similarity: 204/235 (86.8%)
# Gaps: 0/235 ( 0.0%)
# Score: 953.0
#
#
#=======================================
BSNT_02967___ 1 MGDVNYFLTFGAGFLSFISPCCLPLYPAFLSYITGVSMDDVKTEKLLLQK 50
|.|:||.|.|||||||||||||||||||||||||||||.::.::||:.||
BL02937___ccd 1 MADINYILAFGAGFLSFISPCCLPLYPAFLSYITGVSMSEIHSDKLMFQK 50
BSNT_02967___ 51 RSLFHTLCFLLGFSVIFIALGYGTSFIGSLFRDYHDAIRQIGALLIILFG 100
|||.||:.||:|||:||:||||.||.:||.|:|||..|||:||:.||.||
BL02937___ccd 51 RSLVHTVFFLIGFSMIFVALGYSTSLVGSFFKDYHQLIRQLGAVFIIFFG 100
BSNT_02967___ 101 FITLGVFRPEAMMKERRIHFKHKPSGFLGSVLIGMAFAAGWTPCTGPILA 150
|:|||||:||.:|||||:.||::|.|.|||:.||||||||||||||||||
BL02937___ccd 101 FVTLGVFKPEFLMKERRLQFKNRPGGLLGSIGIGMAFAAGWTPCTGPILA 150
BSNT_02967___ 151 AVITLAGTNPGSAVPYMMLYVLGFAVPFLLLSFFITKLKWIRKNQLFIMK 200
|||.||||||.||||||.||.|||::|||||||||||:||:||:||.|||
BL02937___ccd 151 AVIALAGTNPMSAVPYMALYALGFSLPFLLLSFFITKMKWLRKHQLIIMK 200
BSNT_02967___ 201 AGGVLMIVIGVLLFFNWMSLIIILLSDLFGGFTGF 235
.|||.|||:|:||||:||:.|||:||.|||.|.||
BL02937___ccd 201 IGGVAMIVVGILLFFDWMTKIIIVLSSLFGDFRGF 235
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