Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02962 and BL02935

See DNA alignment / Visit BSNT_02962 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence pep-align/BSNT_02962___yneE.1.5803.seq
#    -bsequence pep-align/BL02935___yneE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02962___yneE-BL02935___yneE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02962___yneE-BL02935___yneE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02962___yneE
# 2: BL02935___yneE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     102/148 (68.9%)
# Similarity:   128/148 (86.5%)
# Gaps:           3/148 ( 2.0%)
# Score: 568.5
# 
#
#=======================================

BSNT_02962___      1 MERHYYTYLIKEEFANHYFGRESVMFELFQDYHWTSLEKQQYEMTEKQIQ     50
                     ||||||||||:||||:||||||||||:||.||||||.: |:.::..|||:
BL02935___yne      1 MERHYYTYLIEEEFASHYFGRESVMFKLFYDYHWTSPD-QKSQLAAKQIE     49

BSNT_02962___     51 YITQPIPILHMHQRLKMNLNKTDYRQLDYIYRIALPKAKGHATFMMKEHM    100
                     :||:|||..|:|:|:||||.:.||.|:||:||:.:|  ||.|:|::|:..
BL02935___yne     50 FITKPIPAAHIHKRMKMNLCREDYTQVDYVYRLIVP--KGSASFIIKDRH     97

BSNT_02962___    101 IEIVASGDYEAETIFFEVLRKVSPCFLAMDFNSKRYGWLNPVKERNFV    148
                     |||:|.|.::|||:||||||||||||||||||.|||||||||||||||
BL02935___yne     98 IEILAKGPFDAETVFFEVLRKVSPCFLAMDFNMKRYGWLNPVKERNFV    145


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