Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01088 and BL02926
See
DNA alignment /
Visit
BSNT_01088 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence pep-align/BSNT_01088.1.5803.seq
# -bsequence pep-align/BL02926___yeaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01088-BL02926___yeaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01088-BL02926___yeaD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01088
# 2: BL02926___yeaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity: 182/404 (45.0%)
# Similarity: 269/404 (66.6%)
# Gaps: 7/404 ( 1.7%)
# Score: 966.5
#
#
#=======================================
BSNT_01088 1 MNKKWQWLVYGWKLIILTLLTAAVFSYAMFQGGFVSWFLFYTFLPFVLYA 50
|.::...::|||||.||.||.|:.|.|||||||||||||||:||||.|||
BL02926___yea 1 MRERIGLVMYGWKLFILFLLFASTFCYAMFQGGFVSWFLFYSFLPFALYA 50
BSNT_01088 51 GLLALYPLRSFQASRQMDKTQLHAGDRLGVTVTLRRKLPFPLMYMVIEDC 100
.|.|.|||::..|.|::.:.|..|||:|...|.|:||.|||:|:|::|||
BL02926___yea 51 FLFAFYPLKNLTAERRLSQGQYKAGDQLEAFVVLKRKWPFPIMFMIVEDC 100
BSNT_01088 101 LPEGIESLNRDGAAAKRLVFPWFKRSMTMSYELARVPRGEHHFHSVRVRT 150
||:.: ..||..|.||:|:|||||:.:.|:|.:..||||:|....:||||
BL02926___yea 101 LPDSL-GKNRGSAEAKQLLFPWFKKEIKMAYTIDSVPRGDHRLAKIRVRT 149
BSNT_01088 151 GDVLGLIEKTTFFELDDTLFVYPFYQRFSYQVNERHQEDGVSGSSPIHQH 200
||.|||:|:....:|:.:..|.|.||..:|:.:....::.....|.:.:.
BL02926___yea 150 GDPLGLLERECEIQLEASFLVLPSYQEIAYRASGGSYDEHAGRVSELRRK 199
BSNT_01088 201 HSSVAASVRNYQPGDRFAALDWKTSARRSQLMTKEFEPSRSKNLFLLMDR 250
.|::|:.:|.||||||||.:|||||||||||||||||.::..:|.:.||:
BL02926___yea 200 DSTLASGIREYQPGDRFAWVDWKTSARRSQLMTKEFEQTKGDDLLVFMDQ 249
BSNT_01088 251 FSSDAFEEVVSVTASILYSVLKNGAGAGLASIGKEKNIFPIQEGDQHFKH 300
..|:||||:|:.||||:.|.:::|..|||.|||||:|:||:::|::..:.
BL02926___yea 250 SPSEAFEEIVTFTASIIRSAMRSGTNAGLVSIGKERNVFPVRQGEEQLRK 299
BSNT_01088 301 MLRHLAIAHCDAADPISRYAREELGKPSVRQADQVVVTGQLTEDMLHLAE 350
:..:||||.|:|..|.......|||...:|:|.:.:||.::|.:::...:
BL02926___yea 300 LFYYLAIADCNAVQPFHSLIEGELGHSDMRKAVKYIVTSRITIELVQALK 349
BSNT_01088 351 --IGGGRVTVILAKEKDAELSQAENAMIERMMKRQIRVRVMRGGRVSRVV 398
:.|||..:.|.|:|..:||..|:|.::.:..|.|.|.|:.|...||.:
BL02926___yea 350 KPLSGGRPVICLVKKKGGDLSSEESAAVQHLKARGIEVNVIYGEHFSRGL 399
BSNT_01088 398 ---- 398
BL02926___yea 400 AEAR 403
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.