Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01088 and BL02926
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:35
# Commandline: needle
# -asequence dna-align/BSNT_01088.1.5803.seq
# -bsequence dna-align/BL02926___yeaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01088-BL02926___yeaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01088-BL02926___yeaD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01088
# 2: BL02926___yeaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1428
# Identity: 761/1428 (53.3%)
# Similarity: 761/1428 (53.3%)
# Gaps: 447/1428 (31.3%)
# Score: 1836.5
#
#
#=======================================
BSNT_01088 1 ATGAATAAGAAATGGCAATGG-CTCG---TATATGGTTGGAAGCTGATTA 46
||.|||.|..|||..|| ||.| |.||.||.|||||||||.|||
BL02926___yea 1 ----ATGAGAGAGCGCATCGGTCTTGTGATGTACGGATGGAAGCTGTTTA 46
BSNT_01088 47 TATTAACTTTATTGACGGCTGCTGTT----------TTTTCTTATGCGAT 86
| |.|.|| .||.||||| ||||..||||||||
BL02926___yea 47 T------TCTGTT----TCTTCTGTTTGCTTCAACGTTTTGCTATGCGAT 86
BSNT_01088 87 GTTTCAGGGCGGCTTTGTCAGCTGGTTTTTGTTTTACACGTTTCTCCCTT 136
||||||.||.||.|||||||||||||||.||||.|||.|.||||||||.|
BL02926___yea 87 GTTTCAAGGGGGATTTGTCAGCTGGTTTCTGTTCTACTCATTTCTCCCCT 136
BSNT_01088 137 TTG-TCTTGTATGCCGGGCTGTTGGCCTTATATCCGCT-CCGTTCTTTTC 184
||| .||| |||||....|||||.||.||.|||||||| ..|..|||..|
BL02926___yea 137 TTGCGCTT-TATGCTTTCCTGTTTGCTTTTTATCCGCTGAAGAACTTGAC 185
BSNT_01088 185 ----------AGGCT---TCAA-GGCAAATGGATAAAAC------ACAAT 214
||||| .||| |||| |.|||||.| .||||
BL02926___yea 186 AGCGGAGCGGAGGCTGAGCCAAGGGCA---GTATAAAGCCGGTGATCAAT 232
BSNT_01088 215 TGCATGCGGGGGACAGGC--TGGGCGTAACGGTTACGCTGAGAAGAAAGC 262
|| .|||| |.|.||| |||||..|||||..
BL02926___yea 233 TG-----------GAGGCTTTCGTCGT---------GCTGAAGAGAAAAT 262
BSNT_01088 263 TGCCATTTCCCCTGATGTATATGGTGATTGAAGATTGCCTGCCAGAAGGT 312
.|||.|||||..|.||||.||||.|..|.|||||.||||||||
BL02926___yea 263 GGCCTTTTCCGATCATGTTTATGATCGTGGAAGACTGCCTGCC------- 305
BSNT_01088 313 ATCGAGTCATT----------AAA-------TCGAGACGGAGCCGCGGCC 345
|.||| ||| ||| ||.|.||||
BL02926___yea 306 ------TGATTCGCTGGGGAAAAACAGGGGTTCG-------GCAGAGGCC 342
BSNT_01088 346 AAACGGCTCGTTTTTCCTTGGTTT--AAACGGAGCATGACGATGTCGT-- 391
||||.|||..|.|||||||||||| |||.|.| ||.|..|||.|||
BL02926___yea 343 AAACAGCTTCTCTTTCCTTGGTTTAAAAAAGAA--ATTAAAATGGCGTAC 390
BSNT_01088 392 ATGAATTAGCTCG----GGTACCGCGCGGAGAGCATCACTTTCATTCTG- 436
|.|| ||| |||.|||.|.|||||.|| .|.||..|
BL02926___yea 391 ACGA------TCGATTCGGTTCCGAGAGGAGACCA------CCGTTTAGC 428
BSNT_01088 437 -----TCAGGGTGCGAACCGGGGATGTTCTTGGCTTGATTGAA----AAA 477
||||.||.||.||.||.|||...||.|||.||.|.||| ||.
BL02926___yea 429 AAAAATCAGAGTCCGTACAGGTGATCCGCTCGGCCTGCTGGAAAGGGAAT 478
BSNT_01088 478 ACTACATTTTTTGAGCTGGATGATACCCTGTTTGTTTATCCATTCTATCA 527
.|.|.| ||.|..||||.|.| |||.||||
BL02926___yea 479 GCGAGA----TTCAATTGGAAGCT--------------TCCTTTCT---- 506
BSNT_01088 528 GCGTTT----TTCCTATCAGGTGAATGAGA-GGCATCAGGAAGACGGTGT 572
||||| |||||||||| |||| .||.| ||.|.|.
BL02926___yea 507 -CGTTTTGCCTTCCTATCAG------GAGATCGCTT-------ACCGCGC 542
BSNT_01088 573 AAGCGGTTCTTCTCCTAT-----TCAT-CA-GCACCATTCCTCAG----T 611
.||||| ...|||.||| .||| || ||..|.|| |||| |
BL02926___yea 543 CAGCGG--AGGCTCTTATGACGAGCATGCAGGCCGCGTT--TCAGAGCTT 588
BSNT_01088 612 CGCAGCAAG----------TGTGCG------------GAATTATCAGCCG 639
|||.||||| || ||| ||| |||||||||
BL02926___yea 589 CGCCGCAAGGACAGTACACTG-GCGTCAGGTATCAGAGAA-TATCAGCCG 636
BSNT_01088 640 GGAGACCGGTTTGC-TGCGTTAGATTGGAAGACTTCTGCACGGCGGAGCC 688
||.|||||.||||| || |.|.||.||||||||.||.||.||.||.||||
BL02926___yea 637 GGCGACCGTTTTGCATG-GGTCGACTGGAAGACGTCAGCCCGCCGCAGCC 685
BSNT_01088 689 AGCTGATGACGAAGGAATTTGAGCCTTCTCGCAG-CAAAA-------ATC 730
|||||||||||||||||||||| |||| |.||| |.|
BL02926___yea 686 AGCTGATGACGAAGGAATTTGA--------GCAGACGAAAGGGGATGACC 727
BSNT_01088 731 TGTT--TCTGCTGATGGA-------CCGTTTTTCCTCTGACGCATTCGAA 771
||.| ||| |.||||| ||| |||||.||.||.|||
BL02926___yea 728 TGCTCGTCT--TTATGGATCAGTCCCCG-------TCTGAGGCTTTTGAA 768
BSNT_01088 772 GAGGTCGTTTCAGTGACAGCTTCGATTCTTTATTCTGTTTTAAAAAACGG 821
|||.||||..|..|.||.|||||.||..||..|||.| .||..|||
BL02926___yea 769 GAGATCGTCACGTTTACCGCTTCCATCATTCGTTCGG-----CAATGCGG 813
BSNT_01088 822 CGCGGG-----CGCTGGCCTGGCTTCCATCGGGAAGGAAAAAAACATTTT 866
.||||| .||.||.||.|.||||||.||.|||||....||..|.||
BL02926___yea 814 AGCGGGACGAATGCAGGGCTTGTTTCCATTGGTAAGGAGCGGAATGTCTT 863
BSNT_01088 867 CCCTATTCAGGAAGGGGATCAGCATTT---TAAGCACATGCTTCGGC-AT 912
|||..|||.|.|.|||||..||||..| .|||| || |||..| |.
BL02926___yea 864 CCCGGTTCGGCAGGGGGAAGAGCAGCTGAGAAAGC---TG-TTCTACTAC 909
BSNT_01088 913 TTAGCCATCGCTCATTGTGATGCGG--CAGAC----------CCGATA-A 949
||.||.||.||..|.||..||||.| |||.| |.|||| |
BL02926___yea 910 TTGGCGATTGCCGACTGCAATGCAGTCCAGCCGTTTCACAGTCTGATAGA 959
BSNT_01088 950 G----------------CCGATATGCACGGGAAGAGCTGGGAAAGCCATC 983
| |||||||| ||| ||||||.||
BL02926___yea 960 GGGGGAATTGGGACATTCCGATATG-------AGA------AAAGCCGTC 996
BSNT_01088 984 --------TGTTCGCCAAGCTG-ATCAAGTTGTTGTCACGGGACAGTTAA 1024
||| |.|||||.| ||||.|.| || ||
BL02926___yea 997 AAATATATTGT--GACAAGCCGCATCACGAT-------CG--------AA 1029
BSNT_01088 1025 CGGAAGATATGCTGCA--CCTCGCAGAAATAG---------GAGGCGGCC 1063
| ||.|||| |.|.|.|||||..| | |||||||
BL02926___yea 1030 C--------TGGTGCAGGCTTTGAAGAAACCGCTCTCCGGCG-GGCGGCC 1070
BSNT_01088 1064 GG------GTTACGGTGATACTGGCAAAAGAGAAAGATGCTGAGCTCTCT 1107
.| ||| .|||| |||| |||.|.||.|||.|||.|
BL02926___yea 1071 CGTCATTTGTT-TGGTG----------AAGA-AAAAAGGCGGAGATCTAT 1108
BSNT_01088 1108 CAAGCTGA--AAA-------TG-CCATGATTGAA---CGC-----AT-GA 1138
||||| || ||| || |||..|||.|| ||| || ||
BL02926___yea 1109 CAAGC-GAGGAAAGCGCGGCTGTCCAGCATTTAAAAGCGCGGGGAATCGA 1157
BSNT_01088 1139 TG-AAACGCCAAATCAGAGTT--CGGG--TCATGAGGGGCGGGCGAGTTT 1183
.| |||||.|| || |||| .||| .|||
BL02926___yea 1158 AGTAAACGTCA--------TTTACGGGGAACAT-------------TTTT 1186
BSNT_01088 1184 CGCGTGTTGTTTAG-------------- 1197
|.||.| ||||.|
BL02926___yea 1187 CCCGGG--GTTTGGCTGAAGCGAGGTGA 1212
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