Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00966 and BL02918

See DNA alignment / Visit BSNT_00966 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_00966___ydgD.1.5803.seq
#    -bsequence pep-align/BL02918.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00966___ydgD-BL02918.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00966___ydgD-BL02918.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00966___ydgD
# 2: BL02918
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 115
# Identity:      71/115 (61.7%)
# Similarity:    85/115 (73.9%)
# Gaps:           6/115 ( 5.2%)
# Score: 377.0
# 
#
#=======================================

BSNT_00966___      1 -----MKVSLAVFMLAGGIIKVSRVPFQVEHWRHYQYPLWFLTVTGILEI     45
                          :|..||.|||.||:|||..|||||||||||:||||||:|||.|||
BL02918            1 MAFIFLKAGLAAFMLTGGVIKVLHVPFQVEHWRHYEYPLWFLSVTGCLEI     50

BSNT_00966___     46 AGALAMTAGIWNRYAAIGAGVLFVVLMAGAIHAHMFRARQSVIMAIPAMI     95
                     ||||.|..||||.:.|:|:|:||.:||.||||||:.||||....||||.:
BL02918           51 AGALGMIGGIWNVHLAVGSGLLFSLLMTGAIHAHLVRARQPFFTAIPAAV    100

BSNT_00966___     96 CLIVSI-MIILGSYT    109
                     |||.:: |||:..|.
BL02918          101 CLICALSMIIVELYF    115


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