Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00966 and BL02918
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:30
# Commandline: needle
# -asequence dna-align/BSNT_00966___ydgD.1.5803.seq
# -bsequence dna-align/BL02918.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00966___ydgD-BL02918.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00966___ydgD-BL02918.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00966___ydgD
# 2: BL02918
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 375
# Identity: 234/375 (62.4%)
# Similarity: 234/375 (62.4%)
# Gaps: 72/375 (19.2%)
# Score: 688.0
#
#
#=======================================
BSNT_00966___ 1 ---------------ATGAAAGTCA-GTTTGGCAGTTTTTATGCTTGCGG 34
.|.|||| || |..||||.|..||||||||..|.|
BL02918 1 GTGGCATTTATTTTCTTAAAAG-CAGGGCTGGCGGCATTTATGCTGACCG 49
BSNT_00966___ 35 GAGGCATCATAAAGGTAAGC--CGCGTTCCCTTTCAAGTTGAGCATTGGC 82
|||||.|.||.||||| || |.||||||.||||||||.||.|||||||
BL02918 50 GAGGCGTAATCAAGGT--GCTGCACGTTCCTTTTCAAGTCGAACATTGGC 97
BSNT_00966___ 83 GGCATTATCAATATCCATTATGGTTTCTGACTGTTACTGGCAT-TCTTGA 131
|.||||||.|||||||..|.||||||||..|||||||.|| || |||.||
BL02918 98 GCCATTATGAATATCCGCTGTGGTTTCTTTCTGTTACAGG-ATGTCTCGA 146
BSNT_00966___ 132 AATAGCCGGGGCACTTGCTATGA-CAGCGGGAATTTGGAATCGGTATGCA 180
|||.|||||.||.||||..|||| |.|| |||||||||||| ||
BL02918 147 AATCGCCGGAGCGCTTGGCATGATCGGC-GGAATTTGGAAT--GT----- 188
BSNT_00966___ 181 GCAATTGGAGCAGGTGTTCTGTT------TGTCGTTCTC-------ATGG 217
|||..|| |.|| ||.||| |||..||||| |||.
BL02918 189 GCATCTG-----GCTG-TCGGTTCGGGGCTGTTATTCTCCCTGCTTATGA 232
BSNT_00966___ 218 CGGGAGCCATTCATGCGCATATGTTTCGAGCAAGACAATCGGTCATCATG 267
|.||||||||.|||||.||..||.|.||.||..|.||..|..|..|||.|
BL02918 233 CAGGAGCCATCCATGCCCACCTGGTCCGGGCGCGGCAGCCTTTTTTCACG 282
BSNT_00966___ 268 GCGATACCAGCGATGATTTGTTTGATTGTTT-----CT-ATCATGATCAT 311
||.||.||.||...|.||||||||| ||| || |.|||||||||
BL02918 283 GCCATCCCTGCCGCGGTTTGTTTGA---TTTGCGCCCTAAGCATGATCAT 329
BSNT_00966___ 312 CCTGGGGAGTTACACGTAA------ 330
| |..|||.| |||.
BL02918 330 C--GTCGAGCT----GTACTTCTGA 348
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