Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03513 and BL02917

See DNA alignment / Visit BSNT_03513 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:30
# Commandline: needle
#    -asequence pep-align/BSNT_03513___yqkF.1.5803.seq
#    -bsequence pep-align/BL02917___yqkF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03513___yqkF-BL02917___yqkF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03513___yqkF-BL02917___yqkF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03513___yqkF
# 2: BL02917___yqkF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     228/306 (74.5%)
# Similarity:   271/306 (88.6%)
# Gaps:           0/306 ( 0.0%)
# Score: 1216.0
# 
#
#=======================================

BSNT_03513___      1 MRKRKLGTSDLDISEVGLGCMSLGTEKNKALSILDEAIELGINYLDTADL     50
                     |:||.||.|||.:||||||||||||:|..||||||||:||||||||||||
BL02917___yqk      1 MKKRTLGHSDLQVSEVGLGCMSLGTDKKHALSILDEALELGINYLDTADL     50

BSNT_03513___     51 YDRGRNEEMVGDAIQNRRQDIILATKAGNRWDDGSEGWYWDPSKAYIKEA    100
                     ||.|||||:||:||::||||:||||||||||::|..||:|||.|||||||
BL02917___yqk     51 YDFGRNEEIVGEAIKSRRQDVILATKAGNRWEEGKPGWFWDPRKAYIKEA    100

BSNT_03513___    101 VKKSLTRLKTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRYYGISS    150
                     ||:||.||:|||||||||||||||||||||||||||||||||||:|||||
BL02917___yqk    101 VKRSLKRLQTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRHYGISS    150

BSNT_03513___    151 IRPNVIKEYVKKSNIVSIMMQFSLFDRRPEEWLPLLEEHQISVVARGPVA    200
                     ||||||||||||||||::|||:||.||||||||.|||||.|||:||||:|
BL02917___yqk    151 IRPNVIKEYVKKSNIVTVMMQYSLLDRRPEEWLSLLEEHGISVIARGPLA    200

BSNT_03513___    201 KGLLTEKPLDQASDSMKQNGYLSYSFEELTNARKAMEEVAPDLSMTEKSL    250
                     ||:||||||..|:.|:|::||||||::||...:..:|:.|||||.||.:|
BL02917___yqk    201 KGILTEKPLSDANASIKKSGYLSYSYDELIKTKADIEKTAPDLSATETAL    250

BSNT_03513___    251 QYLLAQPAVASVITGASKIEQLRENIQAANARRLTEEEIKALQSHTKQDI    300
                     :|:||||||.:||.||||:.|||||:::...|.|||:|||||:.:||:|:
BL02917___yqk    251 KYILAQPAVGAVIPGASKLSQLRENVESVGGRSLTEQEIKALRFYTKRDV    300

BSNT_03513___    301 YKTHRS    306
                     |..||.
BL02917___yqk    301 YTAHRE    306


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