Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03517 and BL02916

See DNA alignment / Visit BSNT_03517 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:30
# Commandline: needle
#    -asequence pep-align/BSNT_03517___yqkD.1.5803.seq
#    -bsequence pep-align/BL02916___yqkD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03517___yqkD-BL02916___yqkD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03517___yqkD-BL02916___yqkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03517___yqkD
# 2: BL02916___yqkD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity:     185/310 (59.7%)
# Similarity:   237/310 (76.5%)
# Gaps:           6/310 ( 1.9%)
# Score: 995.0
# 
#
#=======================================

BSNT_03517___      1 MKKILLAIGALVTAVIAIGIVFSNMILFIKKKTDEDIIKRETDNGHDVFE     50
                     |...|.||||::..:.|:||.|:|.|::|||:||:.||:|||.:||...:
BL02916___yqk      1 MLIWLAAIGAVLLFIAALGIYFTNQIMYIKKRTDQYIIERETADGHYDEK     50

BSNT_03517___     51 SFEQMEKTAFVIPSAYGYDIKGYHVAPHDTPNTIIICHGVTMNVLNSLKY    100
                     :|..:.|....:.|:|||:||||:|.||.|.||:|||||||||:|||:||
BL02916___yqk     51 AFAALPKEEITLASSYGYNIKGYYVHPHKTKNTVIICHGVTMNLLNSIKY    100

BSNT_03517___    101 MHLFLDLGWNVLIYDHRRHGQSGGKTTSYGFYEKDDLNKVVSWLKNKTNH    150
                     |:||||||||.:||||||||.|||||||||:|||:||..||:||:.|...
BL02916___yqk    101 MNLFLDLGWNAVIYDHRRHGASGGKTTSYGYYEKNDLKTVVNWLREKHGE    150

BSNT_03517___    151 CGLIGIHGESMGAVTALLYAGAHCSDGADFYIADCPFACFDEQLAYRLRA    200
                     ..|||||||||||||.|||||...:: ||||:||||||.|::||.|||:.
BL02916___yqk    151 QALIGIHGESMGAVTTLLYAGMDDAE-ADFYVADCPFATFEDQLIYRLKE    199

BSNT_03517___    201 DYRLPSWPLLPIADFFLKLRGGYRAREVSPLAVIDKIEKPILFIHSKDDD    250
                     |:.||...:||:|..||:.|.|||.|:||||:|:.||:||:||||||.||
BL02916___yqk    200 DFHLPGAFILPLASLFLRWRDGYRIRDVSPLSVVGKIKKPVLFIHSKHDD    249

BSNT_03517___    251 YIPVSSTERLYEKKRGPKALYIAENGEHAMSYTKNRDTYRKTVQEFLDNM    300
                     |||..|:|.|||||.|.|.|||||.|.||||||:||::|:.||::||..:
BL02916___yqk    250 YIPAESSEMLYEKKPGKKRLYIAERGAHAMSYTQNRNSYKNTVRDFLQEI    299

BSNT_03517___    301 NDSTE-----    305
                     .:..:     
BL02916___yqk    300 TNRHKEGERA    309


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