Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01631 and BL02888
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence pep-align/BSNT_01631___yhdH.1.5803.seq
# -bsequence pep-align/BL02888___yhdH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01631___yhdH-BL02888___yhdH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01631___yhdH-BL02888___yhdH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01631___yhdH
# 2: BL02888___yhdH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 452
# Identity: 336/452 (74.3%)
# Similarity: 399/452 (88.3%)
# Gaps: 1/452 ( 0.2%)
# Score: 1769.0
#
#
#=======================================
BSNT_01631___ 1 MSEQK-TVQWASKIGFVMAAAGSAIGLGAIWKFPYVAGTNGGGAFFLIFV 49
||::: |.:||||:|||:|||||||||||||||||||||:|||||||:||
BL02888___yhd 1 MSDRRMTAKWASKLGFVLAAAGSAIGLGAIWKFPYVAGTSGGGAFFLVFV 50
BSNT_01631___ 50 LFTILLGYPLLVGEFIFGRRNQTNAIDAYKKEAPRSAWFLTGWIGVAACF 99
|||||||||||:|||:.||::|::||..|:|.||.:.|.:|||||:||||
BL02888___yhd 51 LFTILLGYPLLLGEFVLGRKSQSDAIGTYQKIAPGTPWVITGWIGIAACF 100
BSNT_01631___ 100 LVLSFYSVIGGWILLYIVKTASGSLSGLSQAQYGALFASIIQNPVQTLAA 149
|||||||||||||||||:|..:||||||:||.||.||.||||:|:|||||
BL02888___yhd 101 LVLSFYSVIGGWILLYIIKAVTGSLSGLTQAGYGELFGSIIQDPLQTLAA 150
BSNT_01631___ 150 QLVFMALTVLVVARGVQKGIERVSAVMMPILFLLFILLVLRSLTLNGAME 199
||.|:.:|:||||:||||||||||::|||:||:|||.||||:|||..|::
BL02888___yhd 151 QLAFIIMTILVVAKGVQKGIERVSSIMMPLLFILFIALVLRALTLEHAID 200
BSNT_01631___ 200 GVKFLLVPHFGDLTPESILFGLGQAFFTLTLGVSVMVTYSSYLPKTQNIP 249
||:|||||.||.|||::|||.||||||||||||||||||||||.|:||:|
BL02888___yhd 201 GVRFLLVPDFGSLTPQAILFALGQAFFTLTLGVSVMVTYSSYLSKSQNLP 250
BSNT_01631___ 250 RSAASIVLMNIIVTLLAGLAIFPAVFSFGFQPNEGPTLLFTVLPAVFEQL 299
:||.|||:||:.|||||||||||||||||.||::||||||.||||||::|
BL02888___yhd 251 KSALSIVIMNLAVTLLAGLAIFPAVFSFGLQPDQGPTLLFAVLPAVFDRL 300
BSNT_01631___ 300 PFGTLFFIGFLVAFLFAALTSAFSMVEIIVATIGKGDEKKRKKLSWTSGL 349
|||.|||||||.|||||||||||||:|||||.|.|||:.||.|.:||.||
BL02888___yhd 301 PFGMLFFIGFLTAFLFAALTSAFSMIEIIVAAITKGDQTKRGKWTWTIGL 350
BSNT_01631___ 350 LIFLVGIPCCLSYGVLSDVHLFGKTFFDIADFTVSNVLMPSGALLISLFI 399
|||.||||.|||||:|.:..:|.|||||.||:.|||:|||.|||.||:||
BL02888___yhd 351 LIFAVGIPSCLSYGMLDEPFIFKKTFFDAADYVVSNILMPLGALFISIFI 400
BSNT_01631___ 400 PLKISKSELLAEMRNGSNAGKAFFYTWFYLLRFIVPLAIIIVFLNLIGIL 449
|||:||.:|..||::||.|||.||..|||||||:|||||::|||||||:.
BL02888___yhd 401 PLKLSKHDLYEEMKSGSKAGKGFFIVWFYLLRFLVPLAIVLVFLNLIGVF 450
BSNT_01631___ 450 SF 451
||
BL02888___yhd 451 SF 452
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