Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01654 and BL02876

See DNA alignment / Visit BSNT_01654 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence pep-align/BSNT_01654___yhdZ.1.5803.seq
#    -bsequence pep-align/BL02876___npdA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01654___yhdZ-BL02876___npdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01654___yhdZ-BL02876___npdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01654___yhdZ
# 2: BL02876___npdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     177/251 (70.5%)
# Similarity:   202/251 (80.5%)
# Gaps:           6/251 ( 2.4%)
# Score: 936.5
# 
#
#=======================================

BSNT_01654___      1 ME----TFKSILHEAQRIVVLTGAGMSTESGIPDFRSAGGIWTEDASRME     46
                     ||    .|..::..|:||.||||||||||||||||||||||||||.||||
BL02876___npd      1 MEEEALRFADMIENAERITVLTGAGMSTESGIPDFRSAGGIWTEDLSRME     50

BSNT_01654___     47 AMSLDYFLSHPRLFWPKFKELFQMKMSGSFEPNEGHLFLAELEKQGKQVN     96
                     |||.||:..:|:||||||||||||||:|::.||:|||:||||||.||.|.
BL02876___npd     51 AMSRDYYERYPKLFWPKFKELFQMKMTGTYRPNDGHLYLAELEKSGKDVR    100

BSNT_01654___     97 IFTQNIDGLHKKAGSRHVYELHGSIQTAACPACGARYDLPHLLEREVPEC    146
                     :|||||||||.||||||||||||||||||||.|||||.|.|:|:.|||.|
BL02876___npd    101 VFTQNIDGLHLKAGSRHVYELHGSIQTAACPKCGARYGLDHILQEEVPRC    150

BSNT_01654___    147 TAAGNNGDICGTVLKTDVVLFGDAVMHFDTLYEKLDQADLLLVIGTSLEV    196
                     ......|..||.:||||||||||||.|||||:|.|:::||||||||||||
BL02876___npd    151 NRVNGKGRACGFILKTDVVLFGDAVQHFDTLFEVLNESDLLLVIGTSLEV    200

BSNT_01654___    197 APARFVPEDASLIPGMKKVIINLEPTYCDSLFDMVIHQKIGEFARSLGIK    246
                     ||.|||||:|.||||:||.:|||:.|..|.|||:||:|||.||.|.|.. 
BL02876___npd    201 APVRFVPEEAHLIPGLKKAMINLDETPYDHLFDIVINQKIAEFVRKLNH-    249

BSNT_01654___    247 K    247
                      
BL02876___npd    249 -    249


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