Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03039 and BL02874

See DNA alignment / Visit BSNT_03039 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_03039___yoxA.1.5803.seq
#    -bsequence pep-align/BL02874___yoxA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03039___yoxA-BL02874___yoxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03039___yoxA-BL02874___yoxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03039___yoxA
# 2: BL02874___yoxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity:     141/332 (42.5%)
# Similarity:   200/332 (60.2%)
# Gaps:          13/332 ( 3.9%)
# Score: 690.5
# 
#
#=======================================

BSNT_03039___      1 MANFIEKMTYLGTPAIKAGNEHLEMIVVPEWGSNVISLVDKTTNVQLLRE     50
                     |:..::|..:|...||:..|:.||.::||.||||:|||..|...:.||:.
BL02874___yox      1 MSCTVQKSRFLHEEAIRFENDDLEAVLVPGWGSNLISLRWKAGGLNLLKT     50

BSNT_03039___     51 PETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRTYHFDINEKDKHNHL    100
                     |||.|.:...|.|:|||:|||||||..|.|::.||||...||||...|||
BL02874___yox     51 PETKEEYDANPFLFGIPVLFPPNRIDHGRFTYAGRTYELPINEKPLENHL    100

BSNT_03039___    101 HGFLYHEKWNVVTTKQTDEEVIVETEIDLSELPHVQKQFPHHAVVRMTYT    150
                     |||||.:||.|...:.|:|.:||:|.:|..:.|.::..|||...:.:|||
BL02874___yox    101 HGFLYDKKWTVKKMEATEERIIVQTMLDSDDHPGIKSIFPHSFSITITYT    150

BSNT_03039___    151 IKENTLFKHATVMNKGKEAFPWGIGYHTTFIFP------AESSLFSLTAD    194
                     ::...|...|:.:|:|::..|.|:||||:|.:|      .|..||:|.|.
BL02874___yox    151 LEGQHLKIDASAVNRGQDPMPIGLGYHTSFRYPLNESGDKEKCLFTLPAS    200

BSNT_03039___    195 QQWELDERLLPTGKLMGVPNKEALHEGMDLRHKQLDDVFLSSYQKRGGEN    244
                     :.|.|.:|:||||:....   |....|.....::|||: |::.|.:.|.:
BL02874___yox    201 KHWTLTDRMLPTGEYRVT---EEFKAGKMAAGERLDDI-LAAEQDQEGNS    246

BSNT_03039___    245 QAVIYHQHAHISIIYKADEQFKHWVVYNADGKQ-GYLCPEPYTWVTNAVN    293
                     .|||....|.|.:.|:.|..||||||:|....| ..||.|||||:|||.|
BL02874___yox    247 TAVIADSLAGIRVRYQCDGHFKHWVVFNGTSDQDDLLCIEPYTWMTNAPN    296

BSNT_03039___    294 LDLPSSLTGFQVLEPGEETTAKSSITIELNHQ    325
                     ::||.|:|||:.|.|.||.|.:|.|.:...  
BL02874___yox    297 VNLPKSVTGFRDLGPQEELTMRSKIEVGGI--    326


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