Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01689 and BL02866

See DNA alignment / Visit BSNT_01689 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence pep-align/BSNT_01689___yhaQ.1.5803.seq
#    -bsequence pep-align/BL02866___yhaQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01689___yhaQ-BL02866___yhaQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01689___yhaQ-BL02866___yhaQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01689___yhaQ
# 2: BL02866___yhaQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     226/298 (75.8%)
# Similarity:   271/298 (90.9%)
# Gaps:           0/298 ( 0.0%)
# Score: 1225.0
# 
#
#=======================================

BSNT_01689___      1 MLTIDHVTKTFGDYKAVDGLDLDIPEQQMFGLLGANGAGKTTTFRMILGL     50
                     ||.||||||.||.:.||:.|.|:||::|||||||||||||||||||||||
BL02866___yha      1 MLKIDHVTKRFGSFTAVNDLTLEIPDKQMFGLLGANGAGKTTTFRMILGL     50

BSNT_01689___     51 LSITEGSISWKGRPVNYHISNKIGYLPEERGLYPKMKVRDQLVYLARLKG    100
                     |:.|||:::|||:|:||.::|.|.|||||||||||:||:||||||.||||
BL02866___yha     51 LNATEGTVTWKGQPINYGVTNSISYLPEERGLYPKLKVKDQLVYLGRLKG    100

BSNT_01689___    101 MEKREAVKELGTWLERFNITDYENKKVEELSKGNQQKIQFISAVLHKPEL    150
                     |.|:.|:||:..|||||:||:|.:|||||||||||||||||:||||||||
BL02866___yha    101 MTKQNALKEMEKWLERFHITEYADKKVEELSKGNQQKIQFITAVLHKPEL    150

BSNT_01689___    151 LILDEPFSGLDPVNVELLKEAVISLKNSGVSILFSSHRMEHVEELCENLC    200
                     |||||||||||||||||||:||||||:.|.||:||||||||||||||::|
BL02866___yha    151 LILDEPFSGLDPVNVELLKDAVISLKDDGTSIVFSSHRMEHVEELCEHVC    200

BSNT_01689___    201 ILQKGKPVVQGKLKEIKRSFGKKNVTIHSDDDLRFLQSHEGILQWKETAD    250
                     |||:|.|||||||||||||||:||||||:|.||.||:..:||::|::.::
BL02866___yha    201 ILQRGTPVVQGKLKEIKRSFGRKNVTIHADGDLSFLKEADGIVKWRDHSE    250

BSNT_01689___    251 GVKLQIANEDISQEIFAMLQGKGFIRKFELEEPSLHDIFIEKVGAVYE    298
                     ||:||:.||::|||:|.||||:|||||||||||||||||:|||||.||
BL02866___yha    251 GVRLQVENEEVSQELFTMLQGRGFIRKFELEEPSLHDIFVEKVGARYE    298


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