Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01689 and BL02866
See
Amino acid alignment /
Visit
BSNT_01689 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:10
# Commandline: needle
# -asequence dna-align/BSNT_01689___yhaQ.1.5803.seq
# -bsequence dna-align/BL02866___yhaQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01689___yhaQ-BL02866___yhaQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01689___yhaQ-BL02866___yhaQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01689___yhaQ
# 2: BL02866___yhaQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 924
# Identity: 646/924 (69.9%)
# Similarity: 646/924 (69.9%)
# Gaps: 54/924 ( 5.8%)
# Score: 2164.5
#
#
#=======================================
BSNT_01689___ 1 GTGCTTACAATTGATCACGTAACGAAGACATTTGG-AGATTATAAAGCCG 49
.||||.|.|||.||||||||.|||||.|..||.|| ..||| ||.|||||
BL02866___yha 1 ATGCTCAAAATCGATCACGTTACGAAAAGGTTCGGTTCATT-TACAGCCG 49
BSNT_01689___ 50 TTGACGGATTGGAC-TTAGATATTCCGGAACAGCAAATGTTCGGTTTATT 98
|..|| |||..||| .|.||.|||||.||..||||||||||||||.|..|
BL02866___yha 50 TAAAC-GATCTGACGCTGGAGATTCCAGACAAGCAAATGTTCGGTCTGCT 98
BSNT_01689___ 99 AGGCGCAAACGGAGCGGGAAAAACAACGACGTTTCGCATGATCCTAGGAT 148
.|||||.||||||||.||.|||||.|||||.||.||.|||||.||.||..
BL02866___yha 99 CGGCGCCAACGGAGCAGGGAAAACGACGACATTCCGAATGATACTCGGCC 148
BSNT_01689___ 149 TATTAAGCAT--TACGGAGGGCTCAATCAGCTGGAAGGGCCGTCCTGTGA 196
|.|| |.|| .||.|||||..|..|||..|||||.||.|..||..|.|
BL02866___yha 149 TTTT--GAATGCGACAGAGGGTACTGTCACATGGAAAGGACAGCCGATTA 196
BSNT_01689___ 197 ATTATCATATCAGCAACAAAATCGGTTATCTGCCGGAAGAGCGGGGCCTT 246
|.||...|.|||..||||..|||.|.|||.||||.||||||||.||.||.
BL02866___yha 197 ACTACGGTGTCACAAACAGCATCAGCTATTTGCCCGAAGAGCGCGGACTG 246
BSNT_01689___ 247 TATCCGAAAATGAAGGTAAGGGATCAGCTCGTCTATCT----TGCCAGAT 292
||.|||||..|||||||.|..|||||||||||.||.|| .|||
BL02866___yha 247 TACCCGAAGCTGAAGGTGAAAGATCAGCTCGTGTACCTCGGACGCC---- 292
BSNT_01689___ 293 TAAAAGGGATGGAGAAGCGAGAGGCTGTAAAAGAGCTCGGGACATGGCTT 342
|.|||||.|||...||.|.|.|.||..|.||.||..|.|.||..|||||.
BL02866___yha 293 TGAAAGGCATGACCAAACAAAATGCGCTCAAGGAAATGGAGAAGTGGCTC 342
BSNT_01689___ 343 GAACGCTTCAATATTACAGATTACGAGAATAAGAAGGTGGAAGAGCTTTC 392
|||||||||.||||||||||.||||...|.||.|||||.||.|||||.||
BL02866___yha 343 GAACGCTTCCATATTACAGAATACGCCGACAAAAAGGTTGAGGAGCTGTC 392
BSNT_01689___ 393 GAAGGGGAATCAGCAGAAAATCCAATTCATTTCGGCAGTTTTGCATAAGC 442
.||.|||||.|||||.||||||||.||.||..||||.||..||||.||||
BL02866___yha 393 CAAAGGGAACCAGCAAAAAATCCAGTTTATCACGGCCGTGCTGCACAAGC 442
BSNT_01689___ 443 CGGAGCTGCTTATTCTTGATGAACCTTTCAGCGGCCTGGACCCTGTCAAT 492
|||||||..|.|||||.||.||.||.||||||||.||.||.||.||.|||
BL02866___yha 443 CGGAGCTTTTGATTCTCGACGAGCCGTTCAGCGGGCTCGATCCGGTGAAT 492
BSNT_01689___ 493 GTTGAGCTGCTAAAAGAGGCTGTGATCTCGCTGAAAAACAGCGGCGTTTC 542
||.|||||..|||||||.||.||.||.||..|||||.||..||||...||
BL02866___yha 493 GTCGAGCTTTTAAAAGACGCGGTCATTTCTTTGAAAGACGACGGCACCTC 542
BSNT_01689___ 543 TATTTTATTTTCAAGCCATCGGATGGAACATGTGGAGGAGCTTTGTGAGA 592
.|||.|||||||||||||..|.|||||.|||||.||.|||||.||.||..
BL02866___yha 543 GATTGTATTTTCAAGCCACAGAATGGAGCATGTCGAAGAGCTGTGCGAAC 592
BSNT_01689___ 593 ACCTTTGCATATTGCAGAAAGGAAAACCGGTTGTACAAGGCAAGCTGAAG 642
||.|.|||||.||||||...||.|..||.||.||.|||||.||..|.||.
BL02866___yha 593 ACGTCTGCATTTTGCAGCGCGGGACGCCTGTCGTTCAAGGGAAATTAAAA 642
BSNT_01689___ 643 GAGATCAAGCGTTCTTTCGGTAAAAAGAATGTTACCATTCACTCCGATGA 692
||.|||||.|||||||||||.|.|||.|||||.||.||||||.|.||.|.
BL02866___yha 643 GAAATCAAACGTTCTTTCGGCAGAAAAAATGTCACGATTCACGCGGACGG 692
BSNT_01689___ 693 CGATCTGCGCTTTTTGCAGTCCCATGA-AGGCATTCTTCAATGGAAGGAA 741
|||..||.||||.|||.| | |||| |||.||.|
BL02866___yha 693 CGACTTGAGCTTCTTGAA--------AGAGGC----------GGACGGCA 724
BSNT_01689___ 742 ACGGCAGACGGCGTCA------------AG-----CTGCAGATTGCCAAT 774
.||.||.|.|||||.| || ||||||.|.|..|||
BL02866___yha 725 TCGTCAAATGGCGTGATCATTCCGAAGGAGTCCGCCTGCAGGTCGAGAAT 774
BSNT_01689___ 775 GAAGACATTTCTCAAGAGATTTTTGCTATGCTCCAAGGAAAAGGGTTTAT 824
|||||..|.|||||||||.|.|||.|.|||||.||||||...||||||||
BL02866___yha 775 GAAGAAGTCTCTCAAGAGCTGTTTACAATGCTGCAAGGACGCGGGTTTAT 824
BSNT_01689___ 825 CAGAAAGTTTGAGCTTGAAGAGCCGTCACTGCATGATATTTTTATAGAAA 874
||||||||||||.|||||||||||.||..|||||||||||||..|.||||
BL02866___yha 825 CAGAAAGTTTGAACTTGAAGAGCCTTCTTTGCATGATATTTTCGTCGAAA 874
BSNT_01689___ 875 AGGT-GGGGGCCGTCTATGAATAA 897
|||| ||.|.|||| |||||||||
BL02866___yha 875 AGGTAGGTGCCCGT-TATGAATAA 897
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.