Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01624 and BL02857

See DNA alignment / Visit BSNT_01624 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:05
# Commandline: needle
#    -asequence pep-align/BSNT_01624___citR.1.5803.seq
#    -bsequence pep-align/BL02857___citR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01624___citR-BL02857___citR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01624___citR-BL02857___citR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01624___citR
# 2: BL02857___citR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     203/292 (69.5%)
# Similarity:   245/292 (83.9%)
# Gaps:           1/292 ( 0.3%)
# Score: 1064.0
# 
#
#=======================================

BSNT_01624___      1 MDFKWLHTFVTAAKYENFRKTAETLFLSQPTVTVHIKQLEKEISCKLFER     50
                     ||||||||||||||||||||||||||:|||||||.||.||:|:.|:||.|
BL02857___cit      1 MDFKWLHTFVTAAKYENFRKTAETLFISQPTVTVQIKLLEEELGCQLFTR     50

BSNT_01624___     51 KGRQIQLTDEGRAYLPYALRLLDDYENSMAELHRVRQGYSQTLQLAVSPL    100
                     |||.|.||.|||||||:|||||:|||:|||||||:||||||||.||||||
BL02857___cit     51 KGRSIHLTKEGRAYLPFALRLLEDYESSMAELHRIRQGYSQTLNLAVSPL    100

BSNT_01624___    101 IADTVLPSVMKRYTAMNTETEMAVTIFESAEIASLIKAGEADIGLSCLKV    150
                     ||||:||.|:|:|||::..:|:.|.|.||||||.||.||.||||||||.|
BL02857___cit    101 IADTILPFVLKKYTALHPNSEIKVKIAESAEIAPLISAGHADIGLSCLNV    150

BSNT_01624___    151 QSSSLSCHCLYKDPVVLVAPPDKRFIED-NEIDAKEVLEQYLLLTHNHPD    199
                     |||:|:|:.:|.|||:||||.|.|..|. ..:|.:::||:|||||||||:
BL02857___cit    151 QSSNLNCYSMYSDPVILVAPHDGRAAEQAPPLDVEDLLEEYLLLTHNHPE    200

BSNT_01624___    200 YWDDLLRQVRMTFPFVRTMKVTQTHITKRFIKEGLGVSFLPLSTVKRELA    249
                     |||||:||:|:.|||||||.|:|.|||||||.||||:||||||||:|||.
BL02857___cit    201 YWDDLVRQLRIKFPFVRTMLVSQAHITKRFISEGLGISFLPLSTVRRELM    250

BSNT_01624___    250 EKQMIRIPYQSVQLPYAGAYAIALYENKKEKKFLDFLSHFHF    291
                     |.::|.:|...::||.||.|||:|.:|:|.:.||.||:.|.|
BL02857___cit    251 EGRLIEVPCDFMKLPVAGGYAISLKDNEKVEHFLAFLAEFRF    292


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