Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01624 and BL02857
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence dna-align/BSNT_01624___citR.1.5803.seq
# -bsequence dna-align/BL02857___citR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01624___citR-BL02857___citR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01624___citR-BL02857___citR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01624___citR
# 2: BL02857___citR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 927
# Identity: 615/927 (66.3%)
# Similarity: 615/927 (66.3%)
# Gaps: 99/927 (10.7%)
# Score: 1917.0
#
#
#=======================================
BSNT_01624___ 1 ATGGATTTCAAATGGCTTCACACCTTTGTGACCGCTGCAAAATATGAGAA 50
||||||||.|||||||||||.||||||||.||.||.||||||||.||.||
BL02857___cit 1 ATGGATTTTAAATGGCTTCATACCTTTGTCACTGCCGCAAAATACGAAAA 50
BSNT_01624___ 51 CTTCCGAAAAACGGCGGAAACGCTTTTCTTA--TCTCAGCCTACTGTGAC 98
.|||.||||.||||||||||| |||.| ||| ||||||||.||.||.||
BL02857___cit 51 TTTCAGAAAGACGGCGGAAAC-CTTAT-TTATTTCTCAGCCGACCGTCAC 98
BSNT_01624___ 99 CGTACATATCAAGCAATTAGAAAAAGAAATCAGCTGCAAGCTGTTCGAAC 148
|||.||.||.||.|...|.|||.|||||.||.|.|||.||||||||...|
BL02857___cit 99 CGTCCAAATTAAACTGCTTGAAGAAGAACTCGGGTGCCAGCTGTTCACCC 148
BSNT_01624___ 149 GTAAAGGCAGGCAA--ATCCAGCTGACTGATGAAGGCAGGGCGTATTTGC 196
|.|||||.|| || ||.||..|.||..|.|||||..||||.||..|.|
BL02857___cit 149 GCAAAGGAAG--AAGCATTCATTTAACGAAAGAAGGACGGGCTTACCTTC 196
BSNT_01624___ 197 CGTATGCGCTCAGGCTTCTTGATGATTATGAAAACAGCATGGCAGAGCTT 246
|.|.|||.||..|.||..|.||.||.||||||...|||||||||||||||
BL02857___cit 197 CTTTTGCCCTTCGCCTGTTGGAAGACTATGAATCGAGCATGGCAGAGCTT 246
BSNT_01624___ 247 CACAGAGTGAGACAAGGCTACTCTCAAACCTTACAGCTCGCGGTTTCTCC 296
||||||.|.||||||||||||||.||.||.||..|..|.||||||||.||
BL02857___cit 247 CACAGAATCAGACAAGGCTACTCACAGACATTGAACTTAGCGGTTTCGCC 296
BSNT_01624___ 297 GCTTATTGCAGATACTGTGCTTCCTTCTGTCATGAAACGGTACACAGCAA 346
||||||.||.|||||..|.||.||.|.|||..|.|||...||||||||..
BL02857___cit 297 GCTTATCGCCGATACGATTCTCCCATTTGTATTAAAAAAATACACAGCGC 346
BSNT_01624___ 347 T------GAATACGGA-AACAGAAATGGCGGTTACGATTTTCGAATCAGC 389
| ||||.|||| |.||.| ||.|.|||...|||||||||
BL02857___cit 347 TGCATCCGAATTCGGAGATCAAA-------GTAAAGATCGCCGAATCAGC 389
BSNT_01624___ 390 GGAAATCGCGTCACTGATTAAAGCCGGGGAAGCAGATATCGGACTAAGCT 439
.||||||||..|.||||||..|||.||..|.|||||||||||||||||||
BL02857___cit 390 TGAAATCGCTCCCCTGATTTCAGCTGGCCATGCAGATATCGGACTAAGCT 439
BSNT_01624___ 440 GTTTAAAGGTACAATCTTCTTCTTTAAGCTGCCACTGCT------TATAC 483
|.|||||.||.|||||.|| .||.||| .|||||| |.|||
BL02857___cit 440 GCTTAAACGTGCAATCGTC-----AAACCTG-AACTGCTATTCCATGTAC 483
BSNT_01624___ 484 AAAGACCCTGTCGTCCTTGTTGCCCCGCCCGATAA-----GCGTTTCATA 528
|..||.||.||..|..|.||||||||.| ||.| |||.|.||.|
BL02857___cit 484 AGCGATCCCGTGATTTTGGTTGCCCCTC---ATGACGGCCGCGCTGCAGA 530
BSNT_01624___ 529 GAAGACAA-------CGAAATTGATGCCAAAGAGGTGCTCGAACAATACC 571
|||| || .|.||||.|.|.||..||||.|||.||||..
BL02857___cit 531 ----ACAAGCGCCGCCG--CTCGATGTCGAGGATTTGCTTGAAGAATATT 574
BSNT_01624___ 572 TGCTTTTGACCCACAATCATCCTGATTACTGGGACGACTTGCTCCGTCAA 621
||||.||||||||||||||.|||||.||||||||||||.| |||||.
BL02857___cit 575 TGCTGTTGACCCACAATCACCCTGAATACTGGGACGACCT----CGTCAG 620
BSNT_01624___ 622 G----TCAGAATGACATTTCCATTTGTGAGAACAATGAAGGTCACTCAAA 667
| |.||.||.|..|||||.|||||.|||||.|||...||.|..||..
BL02857___cit 621 GCAGCTGAGGATCAAGTTTCCGTTTGTCAGAACGATGCTCGTAAGCCAGG 670
BSNT_01624___ 668 CACATATAACGAAACGGTTTA--TCAAGGAAGGACTCGGAGTTTCATTTC 715
|.|||||.||||||||.|||| ||| |||||||||||..|.||||||.
BL02857___cit 671 CGCATATTACGAAACGATTTATTTCA--GAAGGACTCGGTATATCATTTT 718
BSNT_01624___ 716 TGCCTTTATCTACAGTAAAGCG--------TGAGTTAGCAG--AGA--AA 753
||||..|.||.||.|| ||| ||| |.|.|| ||| ||
BL02857___cit 719 TGCCGCTGTCGACTGT---GCGCCGCGAGCTGA--TGGAAGGAAGATTAA 763
BSNT_01624___ 754 CAGATG----ATCAGAATTCCTTATCAGTCTGTACAGCTGCCCTATGCAG 799
.|||.| .|..||.|||.|.| ||||.|||..|||||
BL02857___cit 764 TAGAGGTGCCGTGCGATTTCATGA-----------AGCTTCCCGTTGCAG 802
BSNT_01624___ 800 GCGCTTACGCGATTGCCCTTTATGAAAATAAGAAAGAAAAAAAATTCTTG 849
|.|..||.||||||...||..|.||.|||.||||.|...|..|.||.|||
BL02857___cit 803 GGGGATATGCGATTAGTCTGAAAGATAATGAGAAGGTCGAGCACTTTTTG 852
BSNT_01624___ 850 GATTTTTTATCACATTTTCATTTTTAG 876
|..||||||.|..|.||.|.|||.||.
BL02857___cit 853 GCGTTTTTAGCCGAGTTCCGTTTCTAA 879
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