Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00892 and BL02855

See DNA alignment / Visit BSNT_00892 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence pep-align/BSNT_00892___ydeE.1.5803.seq
#    -bsequence pep-align/BL02855___ydeE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00892___ydeE-BL02855___ydeE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00892___ydeE-BL02855___ydeE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00892___ydeE
# 2: BL02855___ydeE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 295
# Identity:     216/295 (73.2%)
# Similarity:   258/295 (87.5%)
# Gaps:           1/295 ( 0.3%)
# Score: 1178.0
# 
#
#=======================================

BSNT_00892___      1 MDLLKSMNRALKYIEENLTNDIDFQEAAKLAFCSEYHFKRMFSFLAGISL     50
                     |||||:||:|:.||||:||:.||||..|||::|||||||||||||||:||
BL02855___yde      1 MDLLKNMNQAMAYIEEHLTDSIDFQTVAKLSYCSEYHFKRMFSFLAGVSL     50

BSNT_00892___     51 SEYIRRRRLTLAAFELKDSNVKVIDIAIKYGYNSPDSFARAFQNLHGINP    100
                     |||||||||||||||||::..||||||:||||:|||:|.||||.||||.|
BL02855___yde     51 SEYIRRRRLTLAAFELKNTKRKVIDIAVKYGYHSPDAFTRAFQKLHGITP    100

BSNT_00892___    101 SKARLNGHSLKAYPRMTFQLTIKGGNEMNYRIEEKEAFRIVGIKKRVPII    150
                     ::||.:..:|||||.|||||||:|||||||||.||:||||||||||||::
BL02855___yde    101 TEARHDISTLKAYPPMTFQLTIRGGNEMNYRIVEKKAFRIVGIKKRVPVV    150

BSNT_00892___    151 FKGINPEIASMWESLDEKAINKLKELSNVAPSGLISASTNFSEGRTEEKG    200
                     |.||||:|||||::|..:.|::|||||||.|.|||.||.||||||.||:|
BL02855___yde    151 FHGINPDIASMWKTLSSENIDELKELSNVEPLGLIQASANFSEGRMEEQG    200

BSNT_00892___    201 ELDHYIGAATTKQCPDNFSRLEVPALTWAVFESIGPFPDTLQEVWGRIYS    250
                     |||||||.||||:|||.:.:|||||.||||||:.||||||||.||||||:
BL02855___yde    201 ELDHYIGTATTKECPDQYEQLEVPASTWAVFEAAGPFPDTLQNVWGRIYA    250

BSNT_00892___    251 EWFPSSNYEQIEGPEILWNEHKDVTSPSFKSEIWIPITKKEYVF-    294
                     ||||||:|||.:|||||||:.:|::||:||||||||:.|:.... 
BL02855___yde    251 EWFPSSHYEQTKGPEILWNQDQDISSPTFKSEIWIPVQKRTACKN    295


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