Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_00892 and BL02855

See Amino acid alignment / Visit BSNT_00892 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence dna-align/BSNT_00892___ydeE.1.5803.seq
#    -bsequence dna-align/BL02855___ydeE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00892___ydeE-BL02855___ydeE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00892___ydeE-BL02855___ydeE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00892___ydeE
# 2: BL02855___ydeE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 912
# Identity:     660/912 (72.4%)
# Similarity:   660/912 (72.4%)
# Gaps:          51/912 ( 5.6%)
# Score: 2351.5
# 
#
#=======================================

BSNT_00892___      1 ATGGATTTGCTTAAAAGTATGAAT------AGGGCGTTAAAGTATATTGA     44
                     |||||||||||.||.|..||||||      |.|||      ||||||.||
BL02855___yde      1 ATGGATTTGCTGAAGAACATGAATCAAGCCATGGC------GTATATCGA     44

BSNT_00892___     45 AGAAAACCTCACTAACGATATTGATTTTCAAGAGGCAGCAAAGCTTGCTT     94
                     ||||.||||.||..||..|||.||.||||||..||..||.||||||.|||
BL02855___yde     45 AGAACACCTGACGGACAGTATCGACTTTCAAACGGTTGCGAAGCTTTCTT     94

BSNT_00892___     95 TCTGCTCTGAATATCATTTTAAAAGGATGTTTTCCTTCCTTGCAGGTATT    144
                     .|||||||||||||||||||||||||||||||||.||.|||||.||..||
BL02855___yde     95 ACTGCTCTGAATATCATTTTAAAAGGATGTTTTCTTTTCTTGCCGGGGTT    144

BSNT_00892___    145 TCATTATCGGAATATATTCGTCGCAGACGTCTTACTCTTGCAGCTTTTGA    194
                     ||..|.||.|||||.||.||.|||||.||.|||||.||||||||.|||||
BL02855___yde    145 TCGCTGTCCGAATACATCCGCCGCAGGCGGCTTACCCTTGCAGCGTTTGA    194

BSNT_00892___    195 ACTGAAAGACAGCAATGTAAAAGTGATTGATATTGCAATAAAGTACGGTT    244
                     ||||||..|||..||...||||||||||||||||||..|.||.|||||.|
BL02855___yde    195 ACTGAAGAACACAAAAAGAAAAGTGATTGATATTGCGGTGAAATACGGCT    244

BSNT_00892___    245 ATAACTCACCTGATTCTTTTGCACGGGCATTCCAAAATTTACATGGCATA    294
                     ||.||||.||.|||.|||||.|.||.|||||.|||||..|.||.|||||.
BL02855___yde    245 ATCACTCGCCGGATGCTTTTACGCGCGCATTTCAAAAGCTGCACGGCATT    294

BSNT_00892___    295 AACCCATCAAAAGCCAGACTTAATGGC--CATTCCCTTAAAGCTTATCCA    342
                     |..||..||.|.|||||||...||..|  ||  |.||.|||||.|||||.
BL02855___yde    295 ACGCCGACAGAGGCCAGACACGATATCAGCA--CACTGAAAGCATATCCT    342

BSNT_00892___    343 CGAATGACCTTCCAGCTAACAATTAAAGGAGGAAATGAAATGAACTACCG    392
                     |..||||||||||||.|||||||||.|||||||||.||||||||||||||
BL02855___yde    343 CCGATGACCTTCCAGTTAACAATTAGAGGAGGAAACGAAATGAACTACCG    392

BSNT_00892___    393 TATTGAAGAAAAAGAGGCATTTCGCATCGTTGGCATTAAAAAAAGAGTTC    442
                     |||||.||||||..|||||||.||.|||||.||.||.|||||||||||.|
BL02855___yde    393 TATTGTAGAAAAGAAGGCATTCCGGATCGTCGGAATCAAAAAAAGAGTCC    442

BSNT_00892___    443 CTATTATTTTTAAAGGGATTAATCCGGAGATTGCATCTATGTGGGAAAGT    492
                     ||.|..|.|||.|.||.||.||||||||.||.||.||.||||||.|||.|
BL02855___yde    443 CTGTCGTCTTTCACGGAATCAATCCGGATATCGCCTCGATGTGGAAAACT    492

BSNT_00892___    493 TTAGA----TGAAAA-AGCAATAAATAAACTAAAAGAGCTTTCTAATGTA    537
                     ||| |    |||||| |.|.||.|||    ||||.||||||||.|||||.
BL02855___yde    493 TTA-AGCAGTGAAAACATCGATGAAT----TAAAGGAGCTTTCAAATGTG    537

BSNT_00892___    538 GCACCATCAGGACTCATTAGTGCATCCACCAATTTTTCTGAAGGTCGGAC    587
                     |.|||....|||||.|||...|||||..|.||.||.||.|||||..|||.
BL02855___yde    538 GAACCGCTTGGACTGATTCAAGCATCAGCGAACTTCTCCGAAGGCAGGAT    587

BSNT_00892___    588 TGAGGAAAAAGGAGAGCTCGATCACTATATTGGCGCAGCCACAACGAAAC    637
                     .||.||..|.|||||.||.||.||.|||||.||..||||.|||||||||.
BL02855___yde    588 GGAAGAGCAGGGAGAACTTGACCATTATATCGGTACAGCGACAACGAAAG    637

BSNT_00892___    638 AGTGTCCAGA-TAATTTCTCACGGCTTGAAGTTCCTGCCTTAACGTGGGC    686
                     |.|||||.|| .|||.| ..||.||||||||||||.||||..||.|||||
BL02855___yde    638 AATGTCCGGACCAATAT-GAACAGCTTGAAGTTCCGGCCTCGACATGGGC    686

BSNT_00892___    687 TGTATTCGAATCAATCGGACCATTTCCGGATACACTGCAAGAAGTATGGG    736
                     |||.||.|||.|...|||.||.||||||||.||.||.|||.|.||.||||
BL02855___yde    687 TGTCTTTGAAGCGGCCGGCCCGTTTCCGGACACCCTTCAAAATGTCTGGG    736

BSNT_00892___    737 GACGCATTTATTCCGAATGGTTTCCATCGTCAAATTACGAACAAATAGAA    786
                     |.|||||||||.|.||||||||.||.||.|||.||||.||.||||...||
BL02855___yde    737 GGCGCATTTATGCTGAATGGTTCCCGTCTTCACATTATGAGCAAACGAAA    786

BSNT_00892___    787 GGTCCAGAAATATTGTGGAATGAGCATAAGGATGTAACATCACCATCTTT    836
                     ||.||.|||||..|.||||||.||.||.|.|||.|.|..||.|||.|.||
BL02855___yde    787 GGGCCGGAAATCCTCTGGAATCAGGATCAAGATATCAGCTCCCCAACGTT    836

BSNT_00892___    837 TAAAAGTGAAATTTGGATACCAATTACAAAAAAG------------GAA-    873
                     ||||||.|||||.||||||||..|| ||||||||            ||| 
BL02855___yde    837 TAAAAGCGAAATATGGATACCGGTT-CAAAAAAGAACGGCATGTAAGAAC    885

BSNT_00892___    874 TACGTTTTTTGA    885
                     ||.         
BL02855___yde    886 TAA---------    888


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.