Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01633 and BL02854
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence pep-align/BSNT_01633___yhdI.1.5803.seq
# -bsequence pep-align/BL02854___ydeL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01633___yhdI-BL02854___ydeL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01633___yhdI-BL02854___ydeL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01633___yhdI
# 2: BL02854___ydeL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity: 253/477 (53.0%)
# Similarity: 317/477 (66.5%)
# Gaps: 15/477 ( 3.1%)
# Score: 1230.0
#
#
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BSNT_01633___ 1 MDITPFLDKKSKTPLYEQLYTFFKQEISHARITKGTRLPSKRRLSSLLDV 50
|||||||::....|||:|||||||:.|....|..||:|||||.||..|:|
BL02854___yde 1 MDITPFLNRSGSEPLYQQLYTFFKRSIHSGHIKPGTKLPSKRMLSKHLNV 50
BSNT_01633___ 51 STATIERAYEQLTAEGYVKSKPKIGWFAAEVEPGF------PTAPDHFQQ 94
|..|:|.|||||.||||:.|||:.||||||.|..| |.|....::
BL02854___yde 51 SLTTVEHAYEQLAAEGYLLSKPRKGWFAAEAEGDFAQTAPPPPAEKELEE 100
BSNT_01633___ 95 SVQPGLHEKNAPAIDFHQGSVDPTLFPFNAWRKSIVKSL-ERYSGLFHTS 143
||..|..||||.|.||...||.:.|:|::.|:: |....||. |
BL02854___yde 101 ------HETAANMIDFHHGHVDLASFPVSQWKKTLAKTVGESGYDLFQ-S 143
BSNT_01633___ 144 GDPQGEYELRHMIARFVRLSRGVNCEPGQIIIGAGTTVLLQILCLSLKPG 193
|.|.|:..||.|||.::|.||||.|.|.||||||||.||||:||.....|
BL02854___yde 144 GPPAGDIPLRKMIAVYLRESRGVVCSPEQIIIGAGTPVLLQLLCHLFPKG 193
BSNT_01633___ 194 TKIGFEEPGFHRSRRMFEANHMDVTPICSDAEGVLPDELYRQNPYLMYTT 243
|.:|||.||||||:.:.:....:|.||..|..|:...:|.:..|.|.|||
BL02854___yde 194 TTVGFENPGFHRSKTVLKTGGFNVVPIPVDESGISVQDLEQYQPQLAYTT 243
BSNT_01633___ 244 PSHQFPIGTIMTITRRQELLAWAAETNSFIIEDDYDGEFRYSGHPIPSLQ 293
||||||:|.||.:.||.:||.|||.|.::||||||||||||:|.||||||
BL02854___yde 244 PSHQFPLGMIMPVGRRLQLLDWAAATGAYIIEDDYDGEFRYAGQPIPSLQ 293
BSNT_01633___ 294 GLDPNGRVIYLGTFSKSLLPSLRLSFMIVPPELMEPIQNNAQLMKQTVSA 343
|||.|.||||||||||||:||||:|:|::|..|::...|.|.|.|||||.
BL02854___yde 294 GLDRNDRVIYLGTFSKSLIPSLRISYMVLPFPLVKEGLNMASLFKQTVSR 343
BSNT_01633___ 344 HSQLALADFIETGEWQKHINRMRSLYRKKHAILLEAIRSELGNTVEILGK 393
|.|.|:|.|::.|::|:|:||||:|||||...||:||:.|.|....:.|:
BL02854___yde 344 HVQHAIALFMKNGDYQRHLNRMRTLYRKKRKTLLDAIKREFGGHAAVRGE 393
BSNT_01633___ 394 NSGLHILLRLLFPASEEEAIQAAADHGVTIYPVSPSYKEQTPFASVLIGY 443
|:||||:|.:....|||...|.|.:.||.:||.|.||.......:||:|:
BL02854___yde 394 NAGLHIILEVKSAPSEEWLTQKALEKGVKVYPASVSYMPPPDTHAVLLGF 443
BSNT_01633___ 444 GGLSEEDIRLGIQKLKTAWAPLISSY- 469
|||||:.|..||:||||||.....|.
BL02854___yde 444 GGLSEKSIADGIKKLKTAWFNGGQSQD 470
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