Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01638 and BL02851

See DNA alignment / Visit BSNT_01638 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:06
# Commandline: needle
#    -asequence pep-align/BSNT_01638___sigM.1.5803.seq
#    -bsequence pep-align/BL02851___sigM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01638___sigM-BL02851___sigM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01638___sigM-BL02851___sigM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01638___sigM
# 2: BL02851___sigM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 163
# Identity:     156/163 (95.7%)
# Similarity:   161/163 (98.8%)
# Gaps:           0/163 ( 0.0%)
# Score: 811.0
# 
#
#=======================================

BSNT_01638___      1 MTIDEIYQMYMNDVYRFLLSMTKDKHLAEDLLQETFMRAYIHIHSYDHSK     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL02851___sig      1 MTIDEIYQMYMNDVYRFLLSMTKDKHLAEDLLQETFMRAYIHIHSYDHSK     50

BSNT_01638___     51 VKPWLFQVARNAFIDYVRKHKKEVTISDDLIGSLFQNAVQSPAHQVEIKE    100
                     |||||||||||||||||||||||||||||:||:|||||||||||||||||
BL02851___sig     51 VKPWLFQVARNAFIDYVRKHKKEVTISDDMIGNLFQNAVQSPAHQVEIKE    100

BSNT_01638___    101 VLTGYMSELPDNYREALTLYYLKELNYKEASHIMNISEANFKSVLFRARQ    150
                     |||.||::|||||||||||||||||||||||.:|||||||||||||||||
BL02851___sig    101 VLTLYMNQLPDNYREALTLYYLKELNYKEASSLMNISEANFKSVLFRARQ    150

BSNT_01638___    151 RLKALYNRGVNDE    163
                     |||||||||||||
BL02851___sig    151 RLKALYNRGVNDE    163


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