Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01642 and BL02846

See DNA alignment / Visit BSNT_01642 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence pep-align/BSNT_01642.1.5803.seq
#    -bsequence pep-align/BL02846___cueR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01642-BL02846___cueR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01642-BL02846___cueR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01642
# 2: BL02846___cueR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity:     105/181 (58.0%)
# Similarity:   119/181 (65.7%)
# Gaps:          40/181 (22.1%)
# Score: 532.0
# 
#
#=======================================

BSNT_01642         1 MLLQSDDEFHNFQFRSEKNNKLVQDTVHILNYSHNYNVMVGRDIDGAETY     50
                                                            :.||.||||.|
BL02846___cue      1 ---------------------------------------MRRDADGAEKY     11

BSNT_01642        51 RISELAALAGVTKRTVDYYTNLGLLTPARSCSNYRYYDENALKRLIFIVD    100
                     ||.||||.|||||||||||||||||||.|||||||||||.|||||.||:|
BL02846___cue     12 RIGELAAAAGVTKRTVDYYTNLGLLTPDRSCSNYRYYDEAALKRLKFIMD     61

BSNT_01642       101 CKKQRLALSDIKDRLENQFPSSAKLDDEIGNLALEIDHMNQNISGILHRF    150
                     ||:|||||||||:|||||||||...|||||:|..||||:|.|||.|::|.
BL02846___cue     62 CKQQRLALSDIKERLENQFPSSTVNDDEIGSLTTEIDHVNDNISVIINRL    111

BSNT_01642       151 ERLKPEDRDKLKSKLPPEKLAVFQSFMLLLS    181
                     :||.|::|..|||:|.|||:.|.|||:||| 
BL02846___cue    112 KRLNPDERKILKSRLSPEKMTVIQSFLLLL-    141


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