Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01642 and BL02846
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:07
# Commandline: needle
# -asequence dna-align/BSNT_01642.1.5803.seq
# -bsequence dna-align/BL02846___cueR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01642-BL02846___cueR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01642-BL02846___cueR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01642
# 2: BL02846___cueR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 553
# Identity: 332/553 (60.0%)
# Similarity: 332/553 (60.0%)
# Gaps: 134/553 (24.2%)
# Score: 1230.0
#
#
#=======================================
BSNT_01642 1 ATGTTACTTCAATCAGATGATGAATTCCACAACTTCCAATTCCGGTCTGA 50
BL02846___cue 0 -------------------------------------------------- 0
BSNT_01642 51 AAAAAACAATAAACTTGTGCAAGACACCGTTCATATATTAAACTATTCTC 100
BL02846___cue 0 -------------------------------------------------- 0
BSNT_01642 101 ATAACTATAACGTGATGGTTG-GGAGGGATATAGATGGGGCTGAGACTTA 149
||| ||||||||..|||||||||.||||..||
BL02846___cue 1 ------------------TTGAGGAGGGATGCAGATGGGGCAGAGAAATA 32
BSNT_01642 150 TCGCATCAGTGAACTAGCGGC-ACTCGCCGGAGTAACGAAACGGACAGTT 198
||||||..|.|||.||||.|| .|| ||.||.|||||.||||||||.||.
BL02846___cue 33 TCGCATTGGCGAATTAGCAGCTGCT-GCAGGCGTAACAAAACGGACTGTC 81
BSNT_01642 199 GATTATTATACGAATCTCGGTCTGCTTACGCCGGCCAGATCCTGTTCAAA 248
||||||||||||||||||||.|||.|.|||||.|.||||||.||||||||
BL02846___cue 82 GATTATTATACGAATCTCGGGCTGTTAACGCCTGACAGATCATGTTCAAA 131
BSNT_01642 249 TTACCGTTACTACGACGAAAATGCACTCAAACGACTTATATTTATTGTAG 298
.||||||||.|||||.|||...||.||||||||.||.|..||||||.|.|
BL02846___cue 132 CTACCGTTATTACGATGAAGCCGCTCTCAAACGGCTGAAGTTTATTATGG 181
BSNT_01642 299 ATTGCAAGAAGCAGCGATTGGCCCTGTCCGATATTAAAGATCGACTGGAG 348
|.||||||.|||||.||||||||||||||||.||||||||..|.|||||.
BL02846___cue 182 ACTGCAAGCAGCAGAGATTGGCCCTGTCCGACATTAAAGAAAGGCTGGAA 231
BSNT_01642 349 AACCAGTTTCCCTCTTCAGCT---AAACTTGATGATGAAATTGGAAATCT 395
||||||||||||||||||.|| || |||||||||||||||||..||
BL02846___cue 232 AACCAGTTTCCCTCTTCAACTGTGAA---TGATGATGAAATTGGAAGCCT 278
BSNT_01642 396 GGCATTAGAAATTGATCATATGAATCAAAACATCTCCGGAATCTTGCATC 445
|.||...|||||.||||||.|.|||.|.||.|||||||..|||.| .|.|
BL02846___cue 279 GACAACGGAAATCGATCATGTCAATGACAATATCTCCGTGATCAT-AAAC 327
BSNT_01642 446 GGTTTG-AACGGCTGAAGCCCGAGGATCGTGACAAGCTGAAAAGCAAACT 494
.|.||| ||||||||||.|||||.||.||..|.|..|||||||||...||
BL02846___cue 328 AGATTGAAACGGCTGAATCCCGATGAACGGAAGATTCTGAAAAGCCGTCT 377
BSNT_01642 495 CCCGCCTGAAAAGCTCGCCGTGTTCCAATCATTTATGCTGCTG-TTAAGT 543
..|.||||||||..|..|.||..||||.||||||.|||||||| ||.||
BL02846___cue 378 TTCTCCTGAAAAAATGACGGTCATCCAGTCATTTTTGCTGCTGCTTTAG- 426
BSNT_01642 544 TAA 546
BL02846___cue 426 --- 426
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