Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01649 and BL02843

See DNA alignment / Visit BSNT_01649 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence pep-align/BSNT_01649___yhdW.1.5803.seq
#    -bsequence pep-align/BL02843___yhdW.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01649___yhdW-BL02843___yhdW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01649___yhdW-BL02843___yhdW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01649___yhdW
# 2: BL02843___yhdW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     131/243 (53.9%)
# Similarity:   182/243 (74.9%)
# Gaps:           9/243 ( 3.7%)
# Score: 736.0
# 
#
#=======================================

BSNT_01649___      1 MYIIAHRGASGYAPENTIAAFDLAVKMNADMIELDVQLTKDRQIVVIHDD     50
                     |:||||||||.||||||.|||:.||::.||.||||:|:|||.::.|||||
BL02843___yhd      1 MHIIAHRGASAYAPENTFAAFEKAVELGADFIELDIQITKDGKLAVIHDD     50

BSNT_01649___     51 RVDRTTNGSGFVKDFTLEELQKLDAGSWYGPAFQGERIPTLEAVLKRYHK    100
                     :|||||||:|||:::|:.||::||||||:||.:|||:||:|||||::||.
BL02843___yhd     51 KVDRTTNGTGFVREYTMNELEQLDAGSWFGPEYQGEKIPSLEAVLRKYHN    100

BSNT_01649___    101 KIGLLIELKGHPSQVGIEEEVGQLLGQFSFSINNIVQSFQFRSVQRFREL    150
                     |.|||||:|...:|.|||:..|||:.::..|:|.|||||...:::.|..:
BL02843___yhd    101 KTGLLIEIKSSKTQPGIEKAAGQLISRYGRSMNTIVQSFDAGAMRAFHHM    150

BSNT_01649___    151 YPSIPTAVITRPNFGMLSRNQMKAFRSFANYVNIKYTRLNRLMIGSVHKN    200
                     ||||.|||:.||.||:|.|.:::...|||.||::|.|.::..:|.|:|..
BL02843___yhd    151 YPSIQTAVLIRPRFGLLPRGRLRQIASFAQYVSLKATMISPFLIKSIHSC    200

BSNT_01649___    201 GLNIFAWTVNNQKTAAKLQAMGVDGIVTDYPDFIIKDGKHENI    243
                     .|...|||||.|||.::|::..:|||:|||||:.         
BL02843___yhd    201 DLKALAWTVNGQKTGSRLKSWKIDGIITDYPDYF---------    234


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