Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01655 and BL02841

See DNA alignment / Visit BSNT_01655 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence pep-align/BSNT_01655___yheN.1.5803.seq
#    -bsequence pep-align/BL02841___yheN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01655___yheN-BL02841___yheN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01655___yheN-BL02841___yheN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01655___yheN
# 2: BL02841___yheN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     146/303 (48.2%)
# Similarity:   201/303 (66.3%)
# Gaps:          21/303 ( 6.9%)
# Score: 751.0
# 
#
#=======================================

BSNT_01655___      1 MRQTRGEASPSAVSLAFKFASLAVLCVLLLLMVILGYSNSSTKAKEVTVT     50
                     |||...:.:||...|..|.|...|||::||.:..|..|:::|:.:|:||:
BL02841___yhe      1 MRQVSKKTAPSVAYLLTKAACFFVLCLILLYVWDLSQSSAATEKRELTVS     50

BSNT_01655___     51 TNGQLRDEKESLKLKNDSPDLLIKHLQTKQDM------------------     82
                     .|.|:|.|.:|:.||..:...|:.||.|||.:                  
BL02841___yhe     51 ENSQMRHEGDSVPLKKATQGELLDHLSTKQQIEKRKQEKEKQKAAAEKKK    100

BSNT_01655___     83 ---GDKTVYLTFDDGPSAFTTRLLDVLKSADVKATFFMLSPRMNEFKQAV    129
                        .:|||||||||||||.:.|||.:|...|.|||||||.|.|...|:||
BL02841___yhe    101 EKSKEKTVYLTFDDGPSAVSQRLLQILSEHDAKATFFMLEPNMKLHKEAV    150

BSNT_01655___    130 KRAEKEGHALGLHGVTHNNRLFYQTPTSPLKEMQEARDTLQDITGYKTAL    179
                     ...:::|||||||||||:.:.||:...||..||::|:.||:.|||.:|.|
BL02841___yhe    151 LNMKQQGHALGLHGVTHDQKQFYKGANSPNLEMKQAQKTLKSITGVETHL    200

BSNT_01655___    180 VRTPYGSKPSLTPSQIRNLEKDGFVYWDWTIDSMDWKYRNSKYVTAVLEQ    229
                     :|||||||||||.:|.:.|:|:||:||||.|||:|||||:.|:|..|:.|
BL02841___yhe    201 IRTPYGSKPSLTEAQKKVLKKNGFIYWDWNIDSLDWKYRSQKFVPEVMNQ    250

BSNT_01655___    230 LENMEQSSSGRPNVILMHDLPATVNALPVLINKLKEKGYSFGVLEDTMVP    279
                     |..:|:..:.:|.||||||:|:||.:||:|:..||..||||..|:::|.|
BL02841___yhe    251 LNILEKRQTKQPIVILMHDIPSTVQSLPLLLTNLKNMGYSFATLDESMTP    300

BSNT_01655___    280 VHE    282
                     |||
BL02841___yhe    301 VHE    303


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