Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00992 and BL02839

See DNA alignment / Visit BSNT_00992 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:31
# Commandline: needle
#    -asequence pep-align/BSNT_00992___ydhH.1.5803.seq
#    -bsequence pep-align/BL02839___ydhH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00992___ydhH-BL02839___ydhH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00992___ydhH-BL02839___ydhH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00992___ydhH
# 2: BL02839___ydhH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:      70/165 (42.4%)
# Similarity:   103/165 (62.4%)
# Gaps:           7/165 ( 4.2%)
# Score: 382.0
# 
#
#=======================================

BSNT_00992___      1 MSSHYKYPLIFTAFLLIAFCLIFFSYHLIHHVRLEYPNWQGESKDQNWEA     50
                     |...||.|::|.|.|.:|||.::|...||.....|||.|.|:|.|.||||
BL02839___ydh      1 MKQEYKRPVLFIASLFMAFCAVYFGGRLIGFYMAEYPKWNGQSADGNWEA     50

BSNT_00992___     51 VFTKNEDAPNEYSGKLYWIGDTIETDNTYLESLIVKKDDEVLLSSNTEIP    100
                     |. |..|....:.|:|||.||..:.|:||||.|:||..||::|::..|.|
BL02839___ydh     51 VI-KKIDGRALFGGELYWTGDRGKLDDTYLEKLVVKFGDEIVLNAQIETP     99

BSNT_00992___    101 MRDYSGGTFSDGSAKEKSVSFLERLDEHELEGHDITIEVKWKQGNHYSTS    150
                     ::||:||.|..|.:||:||||||.|:|.|:.|.::|:::.|::|...|.:
BL02839___ydh    100 VKDYAGGKFPGGGSKEQSVSFLEGLEEAEIAGREVTVQLDWREGKQASHT    149

BSNT_00992___    151 QLTLNEKTLFDEKQQ    165
                     ..||::.:.      
BL02839___ydh    150 GFTLDKSSW------    158


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