Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01688 and BL02828

See DNA alignment / Visit BSNT_01688 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence pep-align/BSNT_01688.1.5803.seq
#    -bsequence pep-align/BL02828.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01688-BL02828.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01688-BL02828.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01688
# 2: BL02828
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 61
# Identity:      32/61 (52.5%)
# Similarity:    46/61 (75.4%)
# Gaps:           0/61 ( 0.0%)
# Score: 178.0
# 
#
#=======================================

BSNT_01688         1 MADYFLTVFDPSGNTLVNEQFEAEHEEAAKTHGEALLKEKELHSHTHRLV     50
                     |.:|::||||.||.||:||:|||..:|.||..|..:||||:...||||:|
BL02828            1 MENYYVTVFDTSGETLLNERFEAADDEEAKEKGRGMLKEKQFLEHTHRVV     50

BSNT_01688        51 NAAGKLILFHG     61
                     :::||:|:|..
BL02828           51 HSSGKIIVFRS     61


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.