Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01688 and BL02828
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:10
# Commandline: needle
# -asequence dna-align/BSNT_01688.1.5803.seq
# -bsequence dna-align/BL02828.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01688-BL02828.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01688-BL02828.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01688
# 2: BL02828
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 121/201 (60.2%)
# Similarity: 121/201 (60.2%)
# Gaps: 30/201 (14.9%)
# Score: 304.5
#
#
#=======================================
BSNT_01688 1 ATGGCTGATTATTTCCTTACCGTATTTGATCCT--TCGGGGAACACGCTG 48
||||...||||||...|.|||||.||.||..|| | ||.||| |||||.
BL02828 1 ATGGAAAATTATTATGTAACCGTTTTCGACACTAGT-GGAGAA-ACGCTT 48
BSNT_01688 49 GTAAACGAGCAATTCGA---GGCAGAACATGAAGAAGCGGCA-------- 87
.|.||.||||.|||.|| |||.||..|||||||||||..|
BL02828 49 TTGAATGAGCGATTTGAAGCGGCCGATGATGAAGAAGCGAAAGAGAAAGG 98
BSNT_01688 88 AAAACGCATGGTGAAGCCCTCTTAAAAGAAAAAGAGCTTCAT--AGTCAT 135
||.|.|.|||.||||| .|||||.|| ||..| || |||
BL02828 99 AAGAGGAATGCTGAAG------GAAAAGCAA------TTTTTGGAG-CAT 135
BSNT_01688 136 ACTCATCGTTTAGTCAATGCAGCCGGAAAGCTGATTTTGTTTCACGGATG 185
||.||.||..||||..||.|..||||.||..|.|||.|.||.|.|.|.||
BL02828 136 ACACACCGGGTAGTACATTCGTCCGGTAAAATCATTGTTTTCCGCAGCTG 185
BSNT_01688 186 A 186
|
BL02828 186 A 186
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