Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00734 and BL02817

See DNA alignment / Visit BSNT_00734 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence pep-align/BSNT_00734___ydaD.1.5803.seq
#    -bsequence pep-align/BL02817___ydaD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00734___ydaD-BL02817___ydaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00734___ydaD-BL02817___ydaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00734___ydaD
# 2: BL02817___ydaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity:     232/289 (80.3%)
# Similarity:   258/289 (89.3%)
# Gaps:           3/289 ( 1.0%)
# Score: 1214.0
# 
#
#=======================================

BSNT_00734___      1 --MANYPKE-LPAQTQSRQPGIESEMNPSPVYEYEDYKGADKLKGKVALI     47
                       :.|.... .|||||.|||||||.|||.|:||.|:|||.||||||||||
BL02817___yda      1 MDLRNQQTNGQPAQTQDRQPGIESVMNPRPIYEDENYKGTDKLKGKVALI     50

BSNT_00734___     48 TGGDSGIGRAVSVAYAKEGADIAIVYKDEHEDAEETKKRVEQEGVKCLLI     97
                     |||||||||||:||||||||||:|||.:|||||:|||.|||:|||||||:
BL02817___yda     51 TGGDSGIGRAVAVAYAKEGADISIVYLNEHEDAQETKARVEKEGVKCLLL    100

BSNT_00734___     98 AGDVGEEEFCNEAVGKTVKELGGLDILVNNAGEQHPKESIKDITSEQLHR    147
                     .|||.:|.|||:||.:||||||.||||||||.|||||:|||:|:||||.:
BL02817___yda    101 PGDVRDEAFCNDAVEQTVKELGRLDILVNNAAEQHPKDSIKEISSEQLEK    150

BSNT_00734___    148 TFKTNFYSQFYLTKKAIDYLKPGSAIINTTSINPYVGNPTLIDYTATKGA    197
                     ||||||:|.||.||||||||:||||||||||||||.|||.||||||||||
BL02817___yda    151 TFKTNFFSYFYFTKKAIDYLEPGSAIINTTSINPYRGNPQLIDYTATKGA    200

BSNT_00734___    198 INAFTRTMAQALVKDGIRVNAVAPGPIWTPLIPATFPEETVAQFGQDTPM    247
                     ||||||:|:||||||||||||||||||||||||:||..|.||:||.||||
BL02817___yda    201 INAFTRSMSQALVKDGIRVNAVAPGPIWTPLIPSTFSGEEVAKFGTDTPM    250

BSNT_00734___    248 GRPGQPVEHVGCYVLLASDESSYMTGQTLHVNGGNFVTT    286
                     |||||||:|||||||||||:||||||||||||||:|:||
BL02817___yda    251 GRPGQPVDHVGCYVLLASDDSSYMTGQTLHVNGGDFITT    289


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