Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03394 and BL02791
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:20
# Commandline: needle
# -asequence pep-align/BSNT_03394___gpsA.1.5803.seq
# -bsequence pep-align/BL02791___gpsA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03394___gpsA-BL02791___gpsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03394___gpsA-BL02791___gpsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03394___gpsA
# 2: BL02791___gpsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 346
# Identity: 280/346 (80.9%)
# Similarity: 320/346 (92.5%)
# Gaps: 1/346 ( 0.3%)
# Score: 1460.0
#
#
#=======================================
BSNT_03394___ 1 MKKVTMLGAGSWGTALALVLTDNGNEVCVWAHRADLIHQINELHENKDYL 50
|.||::||||||||||||||.||..:||:|.||.:||.||||.|||||||
BL02791___gps 1 MTKVSILGAGSWGTALALVLADNQYDVCIWGHREELIQQINEHHENKDYL 50
BSNT_03394___ 51 PNVKLSTSIKGTTDMKEAVSDADVIIVAVPTKAIREVLRQAVPFITKKAV 100
|.||||.:::.|||::.||:|...||||||||||||||.|||.||.:||:
BL02791___gps 51 PGVKLSENVRATTDLEAAVADVKTIIVAVPTKAIREVLAQAVSFINQKAI 100
BSNT_03394___ 101 FVHVSKGIEPDSLLRISEIMEIELPSDVRKDIVVLSGPSHAEEVGLRHPT 150
|||||||||||:||||||:|:.|:|:::|:||||||||||||||||||||
BL02791___gps 101 FVHVSKGIEPDTLLRISEMMKEEIPAELREDIVVLSGPSHAEEVGLRHPT 150
BSNT_03394___ 151 TVTASS-KSMRAAEEVQDLFINHNFRVYTNPDIIGVEIGGALKNIIALAA 199
|||.|: .|:.:|:.:||:|:|.|||||||||:|||||||||||:|||||
BL02791___gps 151 TVTVSADSSIESAQAIQDMFMNQNFRVYTNPDMIGVEIGGALKNVIALAA 200
BSNT_03394___ 200 GITDGLGYGDNAKAALITRGLAEIARLGTKMGGNPLTFSGLTGVGDLIVT 249
|||||||||||||||||||||||||||||||||||||||||||:||||||
BL02791___gps 201 GITDGLGYGDNAKAALITRGLAEIARLGTKMGGNPLTFSGLTGIGDLIVT 250
BSNT_03394___ 250 CTSVHSRNWRAGNLLGKGYKLEDVLEEMGMVVEGVRTTKAAYQLSKKYDV 299
|||||||||||||:||||:||::||||||||||||||||||||||||:||
BL02791___gps 251 CTSVHSRNWRAGNMLGKGFKLDEVLEEMGMVVEGVRTTKAAYQLSKKFDV 300
BSNT_03394___ 300 KMPITEALHQVLFNGQKVETAVESLMARGKTHEMEDLVNTFENQVK 345
|||||||||:|||:|:||||||||||||.|||||||||||||||:|
BL02791___gps 301 KMPITEALHKVLFDGEKVETAVESLMARVKTHEMEDLVNTFENQMK 346
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