Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03394 and BL02791
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:20
# Commandline: needle
# -asequence dna-align/BSNT_03394___gpsA.1.5803.seq
# -bsequence dna-align/BL02791___gpsA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03394___gpsA-BL02791___gpsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03394___gpsA-BL02791___gpsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03394___gpsA
# 2: BL02791___gpsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1070
# Identity: 770/1070 (72.0%)
# Similarity: 770/1070 (72.0%)
# Gaps: 61/1070 ( 5.7%)
# Score: 2673.5
#
#
#=======================================
BSNT_03394___ 1 ATGAAAAAAGTCACAATGCTTGGAGCAGGGAGTTGGGGAACAGCACTGGC 50
||||.||||||..|.||..|.|||||.||.||.|||||||||||..||||
BL02791___gps 1 ATGACAAAAGTATCGATTTTGGGAGCCGGAAGCTGGGGAACAGCCTTGGC 50
BSNT_03394___ 51 TTTAGTTCTAACTGATAA----TGGAAATGAAGTGTGTGTGTGGGCTCAC 96
..|.|||.|..|.||.|| | |.||.|||||..|.||||..||.
BL02791___gps 51 GCTCGTTTTGGCGGACAACCAGT----ACGATGTGTGCATATGGGGCCAT 96
BSNT_03394___ 97 CGTGCAGATTTAATTCATCAAATTAATGAGTTGCATGAAAACAAAGATTA 146
||||.|||..|.|||||.|||||.|||||....|||||||||||||||||
BL02791___gps 97 CGTGAAGAACTGATTCAGCAAATCAATGAACATCATGAAAACAAAGATTA 146
BSNT_03394___ 147 TTTGCCGAATGTTAAGCTGTCT----ACATCCATTAAAGGAACAACAGAT 192
|.|||||..|||.||.||.||| ||.|.|.| |..|||||||||
BL02791___gps 147 TCTGCCGGGTGTCAAACTTTCTGAAAACGTGCGT----GCCACAACAGAT 192
BSNT_03394___ 193 -ATGAAAGAGGCTGTTTCAGACGCAGATGTC------ATTATCGTTGCGG 235
.|||| |||| |||..||.|||||| ||.||.||.||.|
BL02791___gps 193 CTTGAA----GCTG---CAGTGGCTGATGTCAAGACGATCATTGTCGCCG 235
BSNT_03394___ 236 TCCCGACAAAAGCAATTCGGGAAGTGCTGAGACAGGCTGTCCCTTTTAT- 284
|.|||||||||||.||.||.|||||..||..|||||||||..|.||.||
BL02791___gps 236 TTCCGACAAAAGCGATCCGCGAAGTTTTGGCACAGGCTGTTTCCTTCATC 285
BSNT_03394___ 285 AACGAAAAAGGCAGTCTTTGTTCATG--TCAGCAAGGGTATTGAGCCAGA 332
||| .|||||||..|.|||||.|||| ||| ||.||.||||||||.||
BL02791___gps 286 AAC-CAAAAGGCGATTTTTGTACATGTTTCA--AAAGGAATTGAGCCTGA 332
BSNT_03394___ 333 TTCACTTCTGCGCATTTCTGAAATTATG------GAAATTGAGCTCCCGA 376
..||||.||.||.|||||||||||.||| |||||| |||.
BL02791___gps 333 CACACTGCTTCGAATTTCTGAAATGATGAAAGAAGAAATT------CCGG 376
BSNT_03394___ 377 GTGATGTCAGAAAAGATATCGTTGTCCTTTCCGGCCCGAGTCATGCGGAA 426
.|||..|.||..|.||.|||||.||.||.|||||.|||||.|||||||||
BL02791___gps 377 CTGAATTAAGGGAGGACATCGTCGTTCTGTCCGGACCGAGCCATGCGGAA 426
BSNT_03394___ 427 GAAGTAGGGTTGCGGCACCCCACAACTGTTACTGCATCTTCAAAGAGCA- 475
|||||.||.||..||||.||.||.||.||.||.|.||||.|..|.||||
BL02791___gps 427 GAAGTCGGTTTAAGGCATCCGACGACAGTAACGGTATCTGCCGACAGCAG 476
BSNT_03394___ 476 ---TGA---GGGCAGCAGAAGAGGTGCAGGATCTATTTATTAATCACAAT 519
||| ||.| ||| |.|.|.||||||.|.|||||.||.||.|||
BL02791___gps 477 CATTGAATCGGCC--CAG--GCGATCCAGGATATGTTTATGAACCAGAAT 522
BSNT_03394___ 520 TTTCGGGTGTACACAAATCCTGACATTATCGGAGTTGAAATCGGAGGGGC 569
||.||.|||||.||.|||||.||.||.|||||.||.||.|||||.||.||
BL02791___gps 523 TTCCGCGTGTATACGAATCCGGATATGATCGGCGTAGAGATCGGCGGCGC 572
BSNT_03394___ 570 TTTAAAAAATATTATTGCCCTTGCTGCAGGAATTACAGATGGTTTAGGGT 619
..|.|||||..|.|||||.|||||.||.||.||||||||.|||||.||.|
BL02791___gps 573 GCTGAAAAACGTCATTGCGCTTGCCGCGGGCATTACAGACGGTTTGGGAT 622
BSNT_03394___ 620 ACGGCGACAATGCCAAAGCTGCTTTGATTACACGCGGACTT-GCCGAAAT 668
||||.||.|||||.|||||.||..||||||||.| ||.||| ||.|||||
BL02791___gps 623 ACGGAGATAATGCGAAAGCCGCGCTGATTACAAG-GGGCTTGGCAGAAAT 671
BSNT_03394___ 669 CGCGAGACTCGGAACGAAAATGGGCGGAAATCCCTTGACGTTCTCTGGAT 718
|||..|.|||||.||.|||||||||||||||||..||||.|||||.||..
BL02791___gps 672 CGCCCGGCTCGGCACAAAAATGGGCGGAAATCCGCTGACATTCTCGGGTC 721
BSNT_03394___ 719 TGACAGGAGTAGGCGATCTGATTGTGACGTGCACAAGTGTTCATTCCAGA 768
|.||.|||.|.||.||..||||.||.||.||||||||.||.|||||..||
BL02791___gps 722 TTACTGGAATCGGGGACTTGATCGTCACCTGCACAAGCGTCCATTCACGA 771
BSNT_03394___ 769 AACTGGCGTGCGGGCAATTTGCTCGGAAAAGGGTACAAGCTTGAAGATGT 818
||.|||||.||.||.|||.||||.||.|||||.|.||||||.||.||.||
BL02791___gps 772 AATTGGCGAGCCGGTAATATGCTGGGTAAAGGCTTCAAGCTGGATGAAGT 821
BSNT_03394___ 819 TCTTGAAGAGATGGGAATGGTAGTCGAAGGCGTCCGCACGACGAAAGCGG 868
|||.|||||.|||||.|||||.|||||.||.|||||||||||.|||||.|
BL02791___gps 822 TCTGGAAGAAATGGGGATGGTCGTCGAGGGGGTCCGCACGACAAAAGCCG 871
BSNT_03394___ 869 CTTACCAGCTTTCGAAGAAATATGATGTTAAAATGCCGATTACAGAAGCT 918
||||.||||||||.|||||||.||||||.|||||||||||.||.|||||.
BL02791___gps 872 CTTATCAGCTTTCAAAGAAATTTGATGTAAAAATGCCGATCACCGAAGCA 921
BSNT_03394___ 919 CTCCATCAGGTCCTATTCAACGGACAAAAAGTGGAAACCGCTGTTGAATC 968
||.||..|.||..|.||..||||..|||||||.||.||.||.||.|||||
BL02791___gps 922 CTGCACAAAGTATTGTTTGACGGCGAAAAAGTTGAGACGGCAGTCGAATC 971
BSNT_03394___ 969 TTTAATGGCGAGAGGGAAAACCCACGAGATGGAGGATTTGGTAAATACGT 1018
.||.|||||.||||..|||||.|||||||||||.|||.|.||.||.||.|
BL02791___gps 972 ATTGATGGCAAGAGTCAAAACACACGAGATGGAAGATCTTGTGAACACAT 1021
BSNT_03394___ 1019 TTGAAAATCAAGTGAAGTAA 1038
|.|||||||||.||||.|.|
BL02791___gps 1022 TCGAAAATCAAATGAAATGA 1041
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