Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_03392 and BL02789

See DNA alignment / Visit BSNT_03392 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:20
# Commandline: needle
#    -asequence pep-align/BSNT_03392___yphF.1.5803.seq
#    -bsequence pep-align/BL02789.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03392___yphF-BL02789.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03392___yphF-BL02789.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03392___yphF
# 2: BL02789
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     153/246 (62.2%)
# Similarity:   199/246 (80.9%)
# Gaps:          10/246 ( 4.1%)
# Score: 835.0
# 
#
#=======================================

BSNT_03392___      1 --MGKLKCAIIFAAVVFLSGCLYPNERKSSVHAIPYQDQLKQVQSAVDEF     48
                       :..:..||:..|:: |||||||.|||:. ::.|:|.|||:||:|||||
BL02789            1 MKIVNVLLAILLTAIM-LSGCLYPEERKAK-NSAPHQHQLKEVQAAVDEF     48

BSNT_03392___     49 QKANGGLLPIQTKDMSTPLYQKYPIDFNRLAPRYIAEPPSTAFESGGDYQ     98
                     ::|.||||||:|:||..|:|||||||||||:|||:||||.|::|:||:|.
BL02789           49 REATGGLLPIKTRDMGVPIYQKYPIDFNRLSPRYMAEPPGTSYENGGEYL     98

BSNT_03392___     99 YVLVDVENDPTVKLIDLKMAEKIRDVKLRIQMYRQEHQYPPYKDVLSRDL    148
                     |||||||..|||||||:||:|.||::|||::||:.:|:|||||.|:|::|
BL02789           99 YVLVDVEKKPTVKLIDVKMSEMIRELKLRVEMYKDQHKYPPYKKVVSKNL    148

BSNT_03392___    149 FTLDEKKLGDGSSLTVTSPISGNSLPLMIDGDGEIYADYRTELTSCLKKS    198
                     |.||.:|||...:.:||||:||.||||::|..|:|..|||.:|...:|||
BL02789          149 FMLDHEKLGLKEAPSVTSPLSGTSLPLLVDEKGDIKVDYRMDLAKLMKKS    198

BSNT_03392___    199 KKTFKPGTEIQDMIWEETPFVPAFSVKYTVNDKQEPVFLENDMKKE    244
                     |||.|||.|:||::||||||||||||||||||||||||||      
BL02789          199 KKTVKPGEEVQDLMWEETPFVPAFSVKYTVNDKQEPVFLE------    238


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.