Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03383 and BL02784

See DNA alignment / Visit BSNT_03383 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:19
# Commandline: needle
#    -asequence pep-align/BSNT_03383___hepS.1.5803.seq
#    -bsequence pep-align/BL02784___hepS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03383___hepS-BL02784___hepS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03383___hepS-BL02784___hepS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03383___hepS
# 2: BL02784___hepS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     158/264 (59.8%)
# Similarity:   192/264 (72.7%)
# Gaps:          19/264 ( 7.2%)
# Score: 755.0
# 
#
#=======================================

BSNT_03383___      1 MQDIYGTLANLNTKLKQKLSHPYLAKHISAPKIDEDKLLLFHALFEEADI     50
                     ||||||.|:.|..||.|||||||||||::|||:|||||.||:|||||.|:
BL02784___hep      1 MQDIYGQLSYLKIKLNQKLSHPYLAKHLTAPKVDEDKLFLFYALFEETDL     50

BSNT_03383___     51 KNNDRENYIVTAMLVQSALDTHDEVTTARVIKRDENKNRQLTVLAGDYFS    100
                     |..|:|:||:||||||:|||||||||||..||:|:.||||||||||||||
BL02784___hep     51 KEADKESYILTAMLVQTALDTHDEVTTAASIKQDDYKNRQLTVLAGDYFS    100

BSNT_03383___    101 GLYYSLLSEMKDIYMIRTLATAIKEINEHKIRLYDRSFKDENDFFESVGI    150
                     |:||||||.|||||||||||.||||||||||||||.|.||.:...:||.|
BL02784___hep    101 GMYYSLLSGMKDIYMIRTLAAAIKEINEHKIRLYDHSAKDADSLKKSVSI    150

BSNT_03383___    151 VESALFHRVAEHFSLPRWKKLSSDFFVFKRLM---NGNDAFLDVIGSFIQ    197
                     ||:||||.:|:||.||.||..::||.||||..   ..:|:.|  :.:.||
BL02784___hep    151 VEAALFHHLADHFYLPHWKTAANDFLVFKRFAAEEKASDSRL--LETIIQ    198

BSNT_03383___    198 LGKTKE---------EILEDCFKKAKNSIESLLPLNSPIQNILINRLKTI    238
                         ||         ::....:|:||.:|...|.....:|..|:.||:.|
BL02784___hep    199 ----KEFPEGQASCGQLAAAAYKEAKLAINQSLAKKPAVQKWLLKRLQEI    244

BSNT_03383___    239 -SQDQTYHQKVEEG    251
                      .:.:|||||||||
BL02784___hep    245 RPEKRTYHQKVEEG    258


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