Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03383 and BL02784
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:19
# Commandline: needle
# -asequence dna-align/BSNT_03383___hepS.1.5803.seq
# -bsequence dna-align/BL02784___hepS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03383___hepS-BL02784___hepS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03383___hepS-BL02784___hepS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03383___hepS
# 2: BL02784___hepS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 843
# Identity: 545/843 (64.7%)
# Similarity: 545/843 (64.7%)
# Gaps: 153/843 (18.1%)
# Score: 1736.0
#
#
#=======================================
BSNT_03383___ 1 TTGCAAGACATCTACGGAACTTTAGCCAATCTGAACACGAAATTAAAACA 50
||||||||||||||||||...|||.|..||.||||.|..||..|.||.||
BL02784___hep 1 TTGCAAGACATCTACGGACAATTATCTTATTTGAAAATCAAGCTGAATCA 50
BSNT_03383___ 51 AAAGCTGTCTCATCCTTATTTAGCGAAGCATATTTCTGCGCCGAAAATTG 100
||||||.||.|||||.|||||.|||||||||.|..|||||||||||.|||
BL02784___hep 51 AAAGCTTTCACATCCATATTTGGCGAAGCATCTGACTGCGCCGAAAGTTG 100
BSNT_03383___ 101 ATGAGGATAAGCTTCTTCTTTTTCATGCTTTATTTGAAGAAGCTGACATA 150
|||||||||||||..|||||||..|.|||.|.|||||.|||.|.||..||
BL02784___hep 101 ATGAGGATAAGCTGTTTCTTTTCTACGCTCTGTTTGAGGAAACGGATTTA 150
BSNT_03383___ 151 AAAAACAAC-GACAGAGAAAATTATATTGTAACAGCGATGCTTGTACAAA 199
|||.| |.| ||||..||||.|||.||..||||.|||||||||||.||||
BL02784___hep 151 AAAGA-AGCTGACAAGGAAAGTTACATCTTAACGGCGATGCTTGTTCAAA 199
BSNT_03383___ 200 GCGCCCTTGATACCCATGATGAAGTGACGACAGCTAGAGTC-ATAAAACG 248
..|||||||||||||||||||||||.|||||.|| ||..|| ||.||||.
BL02784___hep 200 CAGCCCTTGATACCCATGATGAAGTCACGACCGC-AGCTTCAATTAAACA 248
BSNT_03383___ 249 AGACGAAAACAAAAACCGCCAATTGACTGTTCTCGCGGGCGATTATTTCA 298
.|||||..|.|||||||||||..||||.||..|.||.||.|||||.||||
BL02784___hep 249 GGACGATTATAAAAACCGCCAGCTGACCGTATTGGCCGGTGATTACTTCA 298
BSNT_03383___ 299 GCGGGCTGTACTACTCTTTACTATCTGAAATGAAGGATATCTACATGATT 348
||||..||||||||||..|..||||.|..|||||||||||.||.||||||
BL02784___hep 299 GCGGCATGTACTACTCGCTGTTATCGGGTATGAAGGATATTTATATGATT 348
BSNT_03383___ 349 CGGACGCTTGCTACAGCCATTAAAGAAATCAACGAACATAAAATTCGTCT 398
||||||||.|||.|.|||||.||||||||.||||||||.|||||..|.||
BL02784___hep 349 CGGACGCTCGCTGCGGCCATCAAAGAAATAAACGAACACAAAATCAGGCT 398
BSNT_03383___ 399 GTATGACCGTTCTTTC----AAG-----GAC-----GAAAACGATTTTTT 434
.||.||||.||| | ||| ||| |||||
BL02784___hep 399 TTACGACCATTC---CGCAAAAGATGCAGACAGCCTGAAAA--------- 436
BSNT_03383___ 435 CGAAAGTGTCGGCATCGTTGAATCAG--CTTTATT--CCATCGTGTGGCG 480
||||.|||.||||.||.|||.|.| |||| || ||||| |.||.
BL02784___hep 437 --AAAGCGTCAGCATAGTGGAAGCTGCACTTT-TTCACCATC---TCGCC 480
BSNT_03383___ 481 GAACACTTCAGCCTCCCGCGCTGGAAAA-AGCTGTCGAGTGATTTTTTTG 529
||.|||||...|||.||.|.|||||||| |||.| |.|.|||.|||.|||
BL02784___hep 481 GACCACTTTTACCTGCCTCACTGGAAAACAGCCG-CCAATGACTTTCTTG 529
BSNT_03383___ 530 TATTTAA-------GCGGCTTATGAACGGAAA-----TGAT-----GCAT 562
|.||||| |||||..|.||| ||| .||| ||
BL02784___hep 530 TCTTTAAAAGGTTTGCGGCCGAAGAA---AAAGCTTCAGATTCCCGGC-- 574
BSNT_03383___ 563 TTCTGGATGTGATCGGCAGTTTTATACAGCTGGGAAAAA-----CAAAAG 607
|.|||||...|||| ||||| ||||.| |..|||
BL02784___hep 575 TGCTGGAGACGATC---------ATACA-----GAAAGAGTTTCCGGAAG 610
BSNT_03383___ 608 AAGAGATATTA----GA-AGATTG----------TTTTAAAAAAGCGAAA 642
.|.||...|.| || ||.|.| ||.||||.||||.|
BL02784___hep 611 GACAGGCTTCATGCGGACAGCTGGCTGCTGCGGCTTATAAAGAAGCCA-- 658
BSNT_03383___ 643 AACAGCATTG---------AGTCACTT----------CTGCC-TCTAAA- 671
||| ||| ||||.||| |.||| ||.|||
BL02784___hep 659 ---AGC-TTGCGATCAACCAGTCGCTTGCCAAAAAGCCCGCCGTCCAAAA 704
BSNT_03383___ 672 -----TTCACCTATTCAGAACATTTTAATAAACCGTCTG-AAGACAATCA 715
||| |.||.||.||| |.||.|.||.
BL02784___hep 705 ATGGCTTC--------------------TGAAACGCCTGCAGGAAATTCG 734
BSNT_03383___ 716 GCC--AAGATCAAACCTATCATCAGAAAGTGGAAGAAGGGTAA 756
||| ||.|.|.|||.|||||||||||||||||||||||||||
BL02784___hep 735 GCCTGAAAAACGAACTTATCATCAGAAAGTGGAAGAAGGGTAA 777
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