Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03365 and BL02770

See DNA alignment / Visit BSNT_03365 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:11
# Commandline: needle
#    -asequence pep-align/BSNT_03365___trpA.1.5803.seq
#    -bsequence pep-align/BL02770___trpA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03365___trpA-BL02770___trpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03365___trpA-BL02770___trpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03365___trpA
# 2: BL02770___trpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     203/267 (76.0%)
# Similarity:   234/267 (87.6%)
# Gaps:           0/267 ( 0.0%)
# Score: 1036.0
# 
#
#=======================================

BSNT_03365___      1 MFKLDLQPTEKLFIPFITAGDPVPEVSIELAKSLQKAGATALELGVAYSD     50
                     ||.|..||::|||:||||||||:||:|||||||||:|||:||||||.|||
BL02770___trp      1 MFNLKKQPSDKLFVPFITAGDPLPEISIELAKSLQEAGASALELGVPYSD     50

BSNT_03365___     51 PLADGPVIQRASKRALDQGMNIVKAIELGGEMKKNGVNIPIILFTYYNPV    100
                     |||||||||||||||||..|||||||.||||||||||:||||||||||||
BL02770___trp     51 PLADGPVIQRASKRALDNDMNIVKAIRLGGEMKKNGVHIPIILFTYYNPV    100

BSNT_03365___    101 LQLNKEYFFALLQENHIDGLLVPDLPLEESNSLQEECKSHEVTYISLVAP    150
                     |||:.::|||||::|.:|||||||||.|||..||::||.|.:||||||||
BL02770___trp    101 LQLDTDHFFALLRQNQLDGLLVPDLPFEESVYLQQQCKKHGITYISLVAP    150

BSNT_03365___    151 TSESRLKTIIEQAEGFVYCVSSLGVTGVRNEFNSSVYPFIRTVKNLSTVP    200
                     |||||::.|.:|||||||||||||||||||||..||..|||:||.:|:||
BL02770___trp    151 TSESRIQKITQQAEGFVYCVSSLGVTGVRNEFEDSVSSFIRSVKGMSSVP    200

BSNT_03365___    201 VAVGFGISNREQVIKMNEISDGVVVGSALVRKIEELKDRLISAETRNQAL    250
                     ||||||||:.:||..|||::||||||||||||||||||.|::.|||.|||
BL02770___trp    201 VAVGFGISSSKQVEMMNELADGVVVGSALVRKIEELKDELVAPETREQAL    250

BSNT_03365___    251 QEFEDYAMAFSGLYSLK    267
                     :.||.||..|||.|.:|
BL02770___trp    251 KAFEAYAKTFSGSYMVK    267


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.